RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 OTUD7AQ8TE49 926 aaPredicted RBP8.36□□□□□ -1.07
MSH2-204ENST00000461394 JARID2Q92833 1246 aaPredicted RBP8.36□□□□□ -1.07
MSH2-204ENST00000461394 KIF1BPQ96EK5 621 aa8.36□□□□□ -1.07
MSH2-204ENST00000461394 BICC1Q9H694 974 aaKnown RBP8.36□□□□□ -1.07
MSH2-204ENST00000461394 IL1RAPL2Q9NP60 686 aa8.36□□□□□ -1.07
MSH2-204ENST00000461394 USP21Q9UK80 565 aa8.36□□□□□ -1.07
MSH2-204ENST00000461394 TJP1Q07157 1748 aa8.36□□□□□ -1.07
MSH2-204ENST00000461394 BCL9O00512 1426 aa8.36□□□□□ -1.07
MSH2-204ENST00000461394 TRIM6-TRIM34B2RNG4 842 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 MX1P20591 662 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 BECN1Q14457 450 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 VPS72Q15906 364 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 ERC1Q8IUD2 1116 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 RILPL2Q969X0 211 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 GPATCH3Q96I76 525 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 C22orf23Q9BZE7 217 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 CWC25Q9NXE8 425 aaPredicted RBP8.35□□□□□ -1.07
MSH2-204ENST00000461394 STK24Q9Y6E0 443 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 ANKRD36CQ5JPF3 1778 aa8.35□□□□□ -1.07
MSH2-204ENST00000461394 IFIT2P09913 472 aaKnown RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 GSPT1P15170 499 aaKnown RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 PDE1AP54750 535 aa8.34□□□□□ -1.07
MSH2-204ENST00000461394 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 TBC1D9Q6ZT07 1266 aa8.34□□□□□ -1.07
MSH2-204ENST00000461394 CLASRPQ8N2M8 674 aaKnown RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 SIL1Q9H173 461 aa8.34□□□□□ -1.07
MSH2-204ENST00000461394 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
MSH2-204ENST00000461394 UTYO14607 1347 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
MSH2-204ENST00000461394 SDSP20132 328 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 HSPA1LP34931 641 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 TSHZ3Q63HK5 1081 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 LRP10Q7Z4F1 713 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 SMARCC1Q92922 1105 aaPredicted RBP8.33□□□□□ -1.08
MSH2-204ENST00000461394 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 BCL11BQ9C0K0 894 aaPredicted RBP8.33□□□□□ -1.08
MSH2-204ENST00000461394 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
MSH2-204ENST00000461394 NUP98P52948 1817 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
MSH2-204ENST00000461394 SLC4A3P48751 1232 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 MTX1Q13505 466 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 AACSQ86V21 672 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 KCNV2Q8TDN2 545 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
MSH2-204ENST00000461394 AOX1Q06278 1338 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 MAP3K15Q6ZN16 1313 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 ERC2O15083 957 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 MAP4K4O95819 1239 aaPredicted RBP8.31□□□□□ -1.08
MSH2-204ENST00000461394 GPTP24298 496 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 TCIRG1Q13488 830 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 HSP90AB3PQ58FF7 597 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 LMBR1LQ6UX01 489 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
MSH2-204ENST00000461394 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 PALLDQ8WX93 1383 aa8.31□□□□□ -1.08
MSH2-204ENST00000461394 AFF2P51816 1311 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.3□□□□□ -1.08
MSH2-204ENST00000461394 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 H7C1W4 665 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 SIK1P57059 783 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 EPHA10Q5JZY3 1008 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 HSCBQ8IWL3 235 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
MSH2-204ENST00000461394 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 KAZALD1Q96I82 304 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 ZFP91Q96JP5 570 aaPredicted RBP8.3□□□□□ -1.08
MSH2-204ENST00000461394 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 BTAF1O14981 1849 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 MYH3P11055 1940 aa8.3□□□□□ -1.08
MSH2-204ENST00000461394 KCNQ2O43526 872 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 GLRX3O76003 335 aaKnown RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 REC8O95072 547 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 MCCP23508 829 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 IL6STP40189 918 aaPredicted RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 CRKLP46109 303 aaKnown RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 SLC4A9Q96Q91 983 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 ISCA1Q9BUE6 129 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 NHSQ6T4R5 1651 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 THSD7AQ9UPZ6 1657 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 COL5A3P25940 1745 aaPredicted RBP8.29□□□□□ -1.08
MSH2-204ENST00000461394 TTC41PQ6P2S7 1318 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 SALL3Q9BXA9 1300 aa8.29□□□□□ -1.08
MSH2-204ENST00000461394 COL15A1P39059 1388 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
MSH2-204ENST00000461394 PCCAP05165 728 aaPredicted RBP8.28□□□□□ -1.08
MSH2-204ENST00000461394 DSG3P32926 999 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms