RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 IL1RAPL2Q9NP60 686 aa9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 IARSP41252 1262 aaKnown RBP9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 PIP4K2BP78356 416 aa9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 PPP1R2P41236 205 aa9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
MCF2L2-205ENST00000461074 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 IDI1Q13907 227 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 RFC4P35249 363 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 RANBP6O60518 1105 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 SMC1AQ14683 1233 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 AKAP4Q5JQC9 854 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 IL15P40933 162 aaPredicted RBP9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 CNNM3Q8NE01 707 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 ESR2Q92731 530 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 EXOC6BQ9Y2D4 811 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 CALML3P27482 149 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 ZNF804AQ7Z570 1209 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 ZSCAN30Q86W11 494 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 CFAP74Q9C0B2 1584 aa9.72□□□□□ -0.85
MCF2L2-205ENST00000461074 PTPN14Q15678 1187 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 SHTN1A0MZ66 631 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 RAD50Q92878 1312 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 ATL3Q6DD88 541 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 MCM10Q7L590 875 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 FLT4P35916 1363 aa9.71□□□□□ -0.85
MCF2L2-205ENST00000461074 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 CASQ1P31415 396 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 GLT8D2Q9H1C3 349 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 RIMS2Q9UQ26 1411 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 NME9Q86XW9 330 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 EYA3Q99504 573 aa9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.71□□□□□ -0.86
MCF2L2-205ENST00000461074 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 UBA7P41226 1012 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 HOOK2Q96ED9 719 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 BOLA2Q9H3K6 86 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 PIBF1Q8WXW3 757 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 TBCAO75347 108 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 POLR3AO14802 1390 aaPredicted RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 WAPLQ7Z5K2 1190 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 SH2D4AQ9H788 454 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 CKAP4Q07065 602 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 CCDC102BQ68D86 513 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 ZCRB1Q8TBF4 217 aaKnown RBP9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 MAP3K2Q9Y2U5 619 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 TMEM87AQ8NBN3 555 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 TBC1D5Q92609 795 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 DRC1Q96MC2 740 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 NEK1Q96PY6 1258 aa9.7□□□□□ -0.86
MCF2L2-205ENST00000461074 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 UBE2HP62256 183 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 MSANTD4Q8NCY6 345 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 MAP4K4O95819 1239 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 SSR1P43307 286 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 ASXL2Q76L83 1435 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 ACEP12821 1306 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 PABPN1LA6NDY0 278 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 ACTN2P35609 894 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 CGNQ9P2M7 1197 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 TSNARE1Q96NA8 513 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 SETDB2Q96T68 719 aa9.69□□□□□ -0.86
MCF2L2-205ENST00000461074 CFAP43Q8NDM7 1665 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 STX6O43752 255 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 TUBBP07437 444 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 UTP14AQ9BVJ6 771 aaKnown RBP9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 HOXB7P09629 217 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms