RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 SOGA3Q5TF21 947 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
GGA1-216ENST00000460957 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 ABCC12Q96J65 1359 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 NLRP3Q96P20 1036 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 ARFGEF2Q9Y6D5 1785 aa20.4■□□□□ 0.86
GGA1-216ENST00000460957 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
GGA1-216ENST00000460957 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
GGA1-216ENST00000460957 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
GGA1-216ENST00000460957 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
GGA1-216ENST00000460957 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
GGA1-216ENST00000460957 C9orf131Q5VYM1 1079 aa20.38■□□□□ 0.85
GGA1-216ENST00000460957 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
GGA1-216ENST00000460957 MYD88Q99836 296 aa20.38■□□□□ 0.85
GGA1-216ENST00000460957 KLRG2A4D1S0 409 aaPredicted RBP20.37■□□□□ 0.85
GGA1-216ENST00000460957 RASSF7Q02833 373 aa20.37■□□□□ 0.85
GGA1-216ENST00000460957 NEXNQ0ZGT2 675 aa20.37■□□□□ 0.85
GGA1-216ENST00000460957 MIER1Q8N108 512 aa20.37■□□□□ 0.85
GGA1-216ENST00000460957 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
GGA1-216ENST00000460957 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
GGA1-216ENST00000460957 SLX4Q8IY92 1834 aa20.37■□□□□ 0.85
GGA1-216ENST00000460957 GPBP1L1Q9HC44 474 aaPredicted RBP20.36■□□□□ 0.85
GGA1-216ENST00000460957 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
GGA1-216ENST00000460957 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
GGA1-216ENST00000460957 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
GGA1-216ENST00000460957 ISCA1Q9BUE6 129 aa20.35■□□□□ 0.85
GGA1-216ENST00000460957 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
GGA1-216ENST00000460957 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
GGA1-216ENST00000460957 GOLGB1Q14789 3259 aaKnown RBP20.34■□□□□ 0.85
GGA1-216ENST00000460957 E9PSI1 815 aa20.34■□□□□ 0.85
GGA1-216ENST00000460957 VAMP4O75379 141 aa20.34■□□□□ 0.85
GGA1-216ENST00000460957 HCLS1P14317 486 aaPredicted RBP20.34■□□□□ 0.85
GGA1-216ENST00000460957 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
GGA1-216ENST00000460957 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
GGA1-216ENST00000460957 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
GGA1-216ENST00000460957 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
GGA1-216ENST00000460957 LMNB1P20700 586 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 CRY2Q49AN0 593 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 SLC10A5Q5PT55 438 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
GGA1-216ENST00000460957 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
GGA1-216ENST00000460957 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
GGA1-216ENST00000460957 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
GGA1-216ENST00000460957 CWC25Q9NXE8 425 aaPredicted RBP20.32■□□□□ 0.84
GGA1-216ENST00000460957 SBF1O95248 1867 aa20.32■□□□□ 0.84
GGA1-216ENST00000460957 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
GGA1-216ENST00000460957 ADCY9O60503 1353 aa20.32■□□□□ 0.84
GGA1-216ENST00000460957 UTRNP46939 3433 aa20.31■□□□□ 0.84
GGA1-216ENST00000460957 ZNF521Q96K83 1311 aa20.31■□□□□ 0.84
GGA1-216ENST00000460957 FLIIQ13045 1269 aa20.31■□□□□ 0.84
GGA1-216ENST00000460957 TRIM28Q13263 835 aaKnown RBP20.31■□□□□ 0.84
GGA1-216ENST00000460957 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
GGA1-216ENST00000460957 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
GGA1-216ENST00000460957 PPEF1O14829 653 aaPredicted RBP20.3■□□□□ 0.84
GGA1-216ENST00000460957 G2E3Q7L622 706 aa20.3■□□□□ 0.84
GGA1-216ENST00000460957 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
GGA1-216ENST00000460957 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
GGA1-216ENST00000460957 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
GGA1-216ENST00000460957 NFKBIEO00221 500 aa20.29■□□□□ 0.84
GGA1-216ENST00000460957 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
GGA1-216ENST00000460957 HOXA10P31260 410 aaPredicted RBP20.29■□□□□ 0.84
GGA1-216ENST00000460957 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
GGA1-216ENST00000460957 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
GGA1-216ENST00000460957 LAMB2P55268 1798 aa20.29■□□□□ 0.84
GGA1-216ENST00000460957 CC2D2BQ6DHV5 1058 aa20.28■□□□□ 0.84
GGA1-216ENST00000460957 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
GGA1-216ENST00000460957 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
GGA1-216ENST00000460957 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
GGA1-216ENST00000460957 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.83
GGA1-216ENST00000460957 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
GGA1-216ENST00000460957 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
GGA1-216ENST00000460957 DDX60Q8IY21 1712 aaKnown RBP20.26■□□□□ 0.83
GGA1-216ENST00000460957 ABCC4O15439 1325 aa20.26■□□□□ 0.83
GGA1-216ENST00000460957 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
GGA1-216ENST00000460957 TIAM2Q8IVF5 1701 aa20.25■□□□□ 0.83
GGA1-216ENST00000460957 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
GGA1-216ENST00000460957 DPY19L2Q6NUT2 758 aa20.25■□□□□ 0.83
GGA1-216ENST00000460957 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
GGA1-216ENST00000460957 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
GGA1-216ENST00000460957 BBOX1O75936 387 aa20.24■□□□□ 0.83
GGA1-216ENST00000460957 GRAPQ13588 217 aa20.24■□□□□ 0.83
GGA1-216ENST00000460957 CWF19L2Q2TBE0 894 aaKnown RBP20.24■□□□□ 0.83
GGA1-216ENST00000460957 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
GGA1-216ENST00000460957 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
GGA1-216ENST00000460957 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
GGA1-216ENST00000460957 PDE8AO60658 829 aa20.23■□□□□ 0.83
GGA1-216ENST00000460957 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
GGA1-216ENST00000460957 C16orf71Q8IYS4 520 aaPredicted RBP20.23■□□□□ 0.83
GGA1-216ENST00000460957 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
GGA1-216ENST00000460957 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
GGA1-216ENST00000460957 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
GGA1-216ENST00000460957 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
GGA1-216ENST00000460957 CCDC152Q4G0S7 254 aa20.22■□□□□ 0.83
GGA1-216ENST00000460957 ZNF277Q9NRM2 450 aaPredicted RBP20.22■□□□□ 0.83
GGA1-216ENST00000460957 ATP6V0A2Q9Y487 856 aa20.22■□□□□ 0.83
GGA1-216ENST00000460957 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms