RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 POM121CA8CG34 1229 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 M0R2N6 131 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 ZBTB7BO15156 539 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 HIRAP54198 1017 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 USP17L2Q6R6M4 530 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 PROSER2Q86WR7 435 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 UCN2Q96RP3 112 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 STRN4Q9NRL3 753 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 ZNF777Q9ULD5 760 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 ATP9BO43861 1147 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 TRIM26Q12899 539 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 XP32Q5T750 250 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 FNBP4Q8N3X1 1017 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 MDFIQ99750 246 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 PRR12Q9ULL5 1215 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 KIAA1024Q9UPX6 916 aa7.66□□□□□ -1.18
ATPAF1-203ENST00000460928 KDM6BO15054 1643 aa7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 BAG6P46379 1132 aa7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 PCBP4P57723 403 aaKnown RBP7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 PSMA6P60900 246 aaKnown RBP7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 CLDN10P78369 228 aa7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 CCDC102BQ68D86 513 aa7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
ATPAF1-203ENST00000460928 ADGRL1O94910 1474 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 K7ELQ4 463 aaPredicted RBP7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 RANGAP1P46060 587 aaPredicted RBP7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 HDGFL1Q5TGJ6 251 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 SIX5Q8N196 739 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
ATPAF1-203ENST00000460928 CUL7Q14999 1698 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 ELOA3CA0A087WX78 387 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 PALM3A6NDB9 673 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 ELOA3DA6NLF2 546 aaPredicted RBP7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 ELOA3BQ3SY89 546 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 LRRC69Q6ZNQ3 347 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 OGFOD1Q8N543 542 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 ELOA3Q8NG57 546 aa7.63□□□□□ -1.19
ATPAF1-203ENST00000460928 PRXQ9BXM0 1461 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 NUP160Q12769 1436 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 ADARB2-AS1A8MUL3 147 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 SIN3BO75182 1162 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 SH3PXD2AQ5TCZ1 1133 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 RHPN1Q8TCX5 695 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 NEUROD4Q9HD90 331 aa7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
ATPAF1-203ENST00000460928 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 C1QTNF9BB2RNN3 333 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 DKK1O94907 266 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 CD163Q86VB7 1156 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 TNFRSF25Q93038 417 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 TRIM11Q96F44 468 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 CHMP3Q9Y3E7 222 aa7.61□□□□□ -1.19
ATPAF1-203ENST00000460928 ALAS2P22557 587 aa7.6□□□□□ -1.19
ATPAF1-203ENST00000460928 KCNQ4P56696 695 aa7.6□□□□□ -1.19
ATPAF1-203ENST00000460928 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
ATPAF1-203ENST00000460928 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
ATPAF1-203ENST00000460928 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
ATPAF1-203ENST00000460928 SPATA31D1Q6ZQQ2 1576 aa7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 PDIA4P13667 645 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 CHRNA4P43681 627 aa7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 SFSWAPQ12872 951 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 PHACTR1Q9C0D0 580 aa7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 PRDM6Q9NQX0 595 aa7.59□□□□□ -1.19
ATPAF1-203ENST00000460928 SPATA31C1P0DKV0 1188 aa7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 CCDC97Q96F63 343 aaPredicted RBP7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 SLC30A3Q99726 388 aa7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 PLVAPQ9BX97 442 aa7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 EEA1Q15075 1411 aa7.58□□□□□ -1.2
ATPAF1-203ENST00000460928 C21orf2O43822 256 aa7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 TYRO3Q06418 890 aa7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 ZNF594Q96JF6 807 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 BRD7Q9NPI1 651 aa7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 PRG4Q92954 1404 aaPredicted RBP7.57□□□□□ -1.2
ATPAF1-203ENST00000460928 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 FURINP09958 794 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 HIF1AQ16665 826 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 GLMNQ92990 594 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 HSH2DQ96JZ2 352 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 KIAA0586Q9BVV6 1533 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 KIF21BO75037 1637 aa7.56□□□□□ -1.2
ATPAF1-203ENST00000460928 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms