RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 METTL22Q9BUU2 404 aaPredicted RBP26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 UTP14AQ9BVJ6 771 aaKnown RBP26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 PIM2Q9P1W9 311 aa26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 PDZRN3Q9UPQ7 1066 aa26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 MAP3K2Q9Y2U5 619 aa26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 TNRC6CQ9HCJ0 1690 aaKnown RBP26.41■■□□□ 1.82
RPUSD3-210ENST00000460909 ZBED9Q6R2W3 1325 aa26.4■■□□□ 1.82
RPUSD3-210ENST00000460909 RIC1Q4ADV7 1423 aa26.4■■□□□ 1.82
RPUSD3-210ENST00000460909 GTF2E1P29083 439 aaPredicted RBP26.39■■□□□ 1.82
RPUSD3-210ENST00000460909 ZNF428Q96B54 188 aa26.39■■□□□ 1.82
RPUSD3-210ENST00000460909 MYD88Q99836 296 aa26.39■■□□□ 1.82
RPUSD3-210ENST00000460909 RNF123Q5XPI4 1314 aa26.39■■□□□ 1.81
RPUSD3-210ENST00000460909 SLC10A5Q5PT55 438 aa26.38■■□□□ 1.81
RPUSD3-210ENST00000460909 ARFGEF1Q9Y6D6 1849 aa26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 CT47B1P0C2W7 299 aaPredicted RBP26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 SRGNP10124 158 aa26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 SYNE4Q8N205 404 aa26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 TRMT112Q9UI30 125 aaKnown RBP26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 BCS1LQ9Y276 419 aa26.37■■□□□ 1.81
RPUSD3-210ENST00000460909 FKBP5Q13451 457 aaPredicted RBP26.36■■□□□ 1.81
RPUSD3-210ENST00000460909 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
RPUSD3-210ENST00000460909 SSH1Q8WYL5 1049 aa26.36■■□□□ 1.81
RPUSD3-210ENST00000460909 GRIN3BO60391 1043 aa26.35■■□□□ 1.81
RPUSD3-210ENST00000460909 DALRD3Q5D0E6 543 aaKnown RBP26.35■■□□□ 1.81
RPUSD3-210ENST00000460909 IGKV5-2P06315 115 aa26.34■■□□□ 1.81
RPUSD3-210ENST00000460909 CRY2Q49AN0 593 aa26.34■■□□□ 1.81
RPUSD3-210ENST00000460909 CCDC191Q8NCU4 936 aa26.34■■□□□ 1.81
RPUSD3-210ENST00000460909 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
RPUSD3-210ENST00000460909 STYK1Q6J9G0 422 aa26.33■■□□□ 1.81
RPUSD3-210ENST00000460909 C3orf67Q6ZVT6 689 aa26.33■■□□□ 1.81
RPUSD3-210ENST00000460909 MASTLQ96GX5 879 aa26.33■■□□□ 1.81
RPUSD3-210ENST00000460909 SH3TC1Q8TE82 1336 aa26.33■■□□□ 1.81
RPUSD3-210ENST00000460909 DDX60Q8IY21 1712 aaKnown RBP26.32■■□□□ 1.8
RPUSD3-210ENST00000460909 TTLL6Q8N841 843 aa26.32■■□□□ 1.8
RPUSD3-210ENST00000460909 DNAAF4Q8WXU2 420 aa26.32■■□□□ 1.8
RPUSD3-210ENST00000460909 ZNF622Q969S3 477 aaKnown RBP eCLIP26.32■■□□□ 1.8
RPUSD3-210ENST00000460909 LAMB2P55268 1798 aa26.32■■□□□ 1.8
RPUSD3-210ENST00000460909 NPR1P16066 1061 aa26.31■■□□□ 1.8
RPUSD3-210ENST00000460909 FAM89AQ96GI7 184 aa26.31■■□□□ 1.8
RPUSD3-210ENST00000460909 CWC25Q9NXE8 425 aaPredicted RBP26.31■■□□□ 1.8
RPUSD3-210ENST00000460909 F6X3S4 739 aa26.3■■□□□ 1.8
RPUSD3-210ENST00000460909 HCLS1P14317 486 aaPredicted RBP26.3■■□□□ 1.8
RPUSD3-210ENST00000460909 CWF19L2Q2TBE0 894 aaKnown RBP26.3■■□□□ 1.8
RPUSD3-210ENST00000460909 BCL2L13Q9BXK5 485 aa26.3■■□□□ 1.8
RPUSD3-210ENST00000460909 SLX4Q8IY92 1834 aa26.3■■□□□ 1.8
RPUSD3-210ENST00000460909 CHD4Q14839 1912 aa26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 NEURL1BA8MQ27 555 aa26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 NEXNQ0ZGT2 675 aa26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 ZBTB38Q8NAP3 1195 aaPredicted RBP26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 CNKSR1Q969H4 720 aa26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 CACNA1SQ13698 1873 aa26.29■■□□□ 1.8
RPUSD3-210ENST00000460909 HOXA10P31260 410 aaPredicted RBP26.28■■□□□ 1.8
RPUSD3-210ENST00000460909 NLRP3Q96P20 1036 aa26.28■■□□□ 1.8
RPUSD3-210ENST00000460909 PCCAP05165 728 aaPredicted RBP26.27■■□□□ 1.8
RPUSD3-210ENST00000460909 RARSP54136 660 aaKnown RBP26.27■■□□□ 1.8
RPUSD3-210ENST00000460909 RTL5Q5HYW3 569 aaPredicted RBP26.27■■□□□ 1.8
RPUSD3-210ENST00000460909 LINS1Q8NG48 757 aa26.27■■□□□ 1.8
RPUSD3-210ENST00000460909 BRPF1P55201 1214 aaPredicted RBP26.26■■□□□ 1.79
RPUSD3-210ENST00000460909 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
RPUSD3-210ENST00000460909 SMC4Q9NTJ3 1288 aa26.26■■□□□ 1.79
RPUSD3-210ENST00000460909 PTPRCP08575 1304 aa26.25■■□□□ 1.79
RPUSD3-210ENST00000460909 BEND3Q5T5X7 828 aa26.25■■□□□ 1.79
RPUSD3-210ENST00000460909 IRS4O14654 1257 aaPredicted RBP26.24■■□□□ 1.79
RPUSD3-210ENST00000460909 ALDH1B1P30837 517 aa26.24■■□□□ 1.79
RPUSD3-210ENST00000460909 GCKRQ14397 625 aa26.24■■□□□ 1.79
RPUSD3-210ENST00000460909 JARID2Q92833 1246 aaPredicted RBP26.24■■□□□ 1.79
RPUSD3-210ENST00000460909 C7orf43Q8WVR3 580 aa26.23■■□□□ 1.79
RPUSD3-210ENST00000460909 RPGRQ92834 1020 aaKnown RBP26.23■■□□□ 1.79
RPUSD3-210ENST00000460909 CRAMP1Q96RY5 1269 aa26.23■■□□□ 1.79
RPUSD3-210ENST00000460909 CDHR2Q9BYE9 1310 aa26.22■■□□□ 1.79
RPUSD3-210ENST00000460909 H7C1W4 665 aa26.22■■□□□ 1.79
RPUSD3-210ENST00000460909 ARHGAP27Q6ZUM4 889 aa26.22■■□□□ 1.79
RPUSD3-210ENST00000460909 C21orf2O43822 256 aa26.21■■□□□ 1.79
RPUSD3-210ENST00000460909 SF3B3Q15393 1217 aaKnown RBP26.21■■□□□ 1.79
RPUSD3-210ENST00000460909 CASP7P55210 303 aa26.2■■□□□ 1.78
RPUSD3-210ENST00000460909 RBM17Q96I25 401 aaKnown RBP26.2■■□□□ 1.78
RPUSD3-210ENST00000460909 FER1L6Q2WGJ9 1857 aa26.19■■□□□ 1.78
RPUSD3-210ENST00000460909 ZNF219Q9P2Y4 722 aaPredicted RBP26.19■■□□□ 1.78
RPUSD3-210ENST00000460909 TAF1P21675 1872 aa26.19■■□□□ 1.78
RPUSD3-210ENST00000460909 SLC4A10Q6U841 1118 aa26.18■■□□□ 1.78
RPUSD3-210ENST00000460909 NOB1Q9ULX3 412 aaKnown RBP26.18■■□□□ 1.78
RPUSD3-210ENST00000460909 ABCC4O15439 1325 aa26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 PDE8AO60658 829 aa26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 ALDH1L1O75891 902 aa26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 HSP90B1P14625 803 aaKnown RBP26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 UBE3BQ7Z3V4 1068 aa26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 SBF1O95248 1867 aa26.17■■□□□ 1.78
RPUSD3-210ENST00000460909 BCAR3O75815 825 aa26.16■■□□□ 1.78
RPUSD3-210ENST00000460909 OLFM4Q6UX06 510 aa26.16■■□□□ 1.78
RPUSD3-210ENST00000460909 SRCIN1Q9C0H9 1055 aa26.16■■□□□ 1.78
RPUSD3-210ENST00000460909 MYH3P11055 1940 aa26.16■■□□□ 1.78
RPUSD3-210ENST00000460909 COL4A1P02462 1669 aa26.15■■□□□ 1.78
RPUSD3-210ENST00000460909 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
RPUSD3-210ENST00000460909 NFKBIEO00221 500 aa26.15■■□□□ 1.78
RPUSD3-210ENST00000460909 PRELPP51888 382 aa26.14■■□□□ 1.78
RPUSD3-210ENST00000460909 SOGA3Q5TF21 947 aa26.14■■□□□ 1.78
RPUSD3-210ENST00000460909 DDX46Q7L014 1031 aaKnown RBP26.14■■□□□ 1.78
RPUSD3-210ENST00000460909 PLA2G12BQ9BX93 195 aa26.14■■□□□ 1.78
RPUSD3-210ENST00000460909 KIF16BQ96L93 1317 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms