RNA–Protein interactions for RNA: ENST00000460808.5

TGFA-208, Transcript of transforming growth factor alpha, humanhuman

TSL 4

Gene TGFA, Length 470 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-208ENST00000460808 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
TGFA-208ENST00000460808 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
TGFA-208ENST00000460808 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
TGFA-208ENST00000460808 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
TGFA-208ENST00000460808 RASSF7Q02833 373 aa15.45■□□□□ 0.06
TGFA-208ENST00000460808 AIMP1Q12904 312 aaKnown RBP15.45■□□□□ 0.06
TGFA-208ENST00000460808 HSP90AB3PQ58FF7 597 aa15.45■□□□□ 0.06
TGFA-208ENST00000460808 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
TGFA-208ENST00000460808 ZNF622Q969S3 477 aaKnown RBP eCLIP15.45■□□□□ 0.06
TGFA-208ENST00000460808 FANCIQ9NVI1 1328 aa15.44■□□□□ 0.06
TGFA-208ENST00000460808 C21orf2O43822 256 aa15.44■□□□□ 0.06
TGFA-208ENST00000460808 TRIM28Q13263 835 aaKnown RBP15.44■□□□□ 0.06
TGFA-208ENST00000460808 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
TGFA-208ENST00000460808 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
TGFA-208ENST00000460808 LMNB1P20700 586 aa15.43■□□□□ 0.06
TGFA-208ENST00000460808 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
TGFA-208ENST00000460808 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
TGFA-208ENST00000460808 SYNE4Q8N205 404 aa15.43■□□□□ 0.06
TGFA-208ENST00000460808 TAF1P21675 1872 aa15.42■□□□□ 0.06
TGFA-208ENST00000460808 CEP350Q5VT06 3117 aa15.42■□□□□ 0.06
TGFA-208ENST00000460808 KIF3CO14782 793 aa15.42■□□□□ 0.06
TGFA-208ENST00000460808 NPHP1O15259 732 aa15.42■□□□□ 0.06
TGFA-208ENST00000460808 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
TGFA-208ENST00000460808 COL4A1P02462 1669 aa15.41■□□□□ 0.06
TGFA-208ENST00000460808 TWISTNBQ3B726 338 aaPredicted RBP15.41■□□□□ 0.06
TGFA-208ENST00000460808 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
TGFA-208ENST00000460808 OLFM4Q6UX06 510 aa15.41■□□□□ 0.06
TGFA-208ENST00000460808 RNF181Q9P0P0 153 aa15.41■□□□□ 0.06
TGFA-208ENST00000460808 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
TGFA-208ENST00000460808 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
TGFA-208ENST00000460808 VAMP4O75379 141 aa15.4■□□□□ 0.06
TGFA-208ENST00000460808 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
TGFA-208ENST00000460808 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
TGFA-208ENST00000460808 GPBP1L1Q9HC44 474 aaPredicted RBP15.4■□□□□ 0.06
TGFA-208ENST00000460808 GTF2E1P29083 439 aaPredicted RBP15.39■□□□□ 0.05
TGFA-208ENST00000460808 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
TGFA-208ENST00000460808 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
TGFA-208ENST00000460808 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
TGFA-208ENST00000460808 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
TGFA-208ENST00000460808 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
TGFA-208ENST00000460808 COL4A5P29400 1685 aa15.38■□□□□ 0.05
TGFA-208ENST00000460808 WDR90Q96KV7 1748 aa15.38■□□□□ 0.05
TGFA-208ENST00000460808 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
TGFA-208ENST00000460808 G2E3Q7L622 706 aa15.38■□□□□ 0.05
TGFA-208ENST00000460808 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
TGFA-208ENST00000460808 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
TGFA-208ENST00000460808 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
TGFA-208ENST00000460808 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 EXOSC9Q06265 439 aaKnown RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
TGFA-208ENST00000460808 ZNF526Q8TF50 670 aaPredicted RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
TGFA-208ENST00000460808 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
TGFA-208ENST00000460808 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
TGFA-208ENST00000460808 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
TGFA-208ENST00000460808 ABCC4O15439 1325 aa15.36■□□□□ 0.05
TGFA-208ENST00000460808 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 IGKV5-2P06315 115 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 FKBP4Q02790 459 aaKnown RBP eCLIP15.35■□□□□ 0.05
TGFA-208ENST00000460808 GOLGA2Q08379 1002 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 CC2D2BQ6DHV5 1058 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 CCDC191Q8NCU4 936 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 RPGRQ92834 1020 aaKnown RBP15.35■□□□□ 0.05
TGFA-208ENST00000460808 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 PSMD1Q99460 953 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 DUOX1Q9NRD9 1551 aa15.35■□□□□ 0.05
TGFA-208ENST00000460808 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 POTECB2RU33 542 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 TCERG1O14776 1098 aaKnown RBP15.34■□□□□ 0.05
TGFA-208ENST00000460808 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
TGFA-208ENST00000460808 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
TGFA-208ENST00000460808 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 MYH3P11055 1940 aa15.34■□□□□ 0.05
TGFA-208ENST00000460808 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
TGFA-208ENST00000460808 ZNF428Q96B54 188 aa15.33■□□□□ 0.04
TGFA-208ENST00000460808 MYD88Q99836 296 aa15.33■□□□□ 0.04
TGFA-208ENST00000460808 ATP6V0A2Q9Y487 856 aa15.33■□□□□ 0.04
TGFA-208ENST00000460808 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
TGFA-208ENST00000460808 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
TGFA-208ENST00000460808 PCCAP05165 728 aaPredicted RBP15.32■□□□□ 0.04
TGFA-208ENST00000460808 FLIIQ13045 1269 aa15.32■□□□□ 0.04
TGFA-208ENST00000460808 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
TGFA-208ENST00000460808 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
TGFA-208ENST00000460808 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
TGFA-208ENST00000460808 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
TGFA-208ENST00000460808 BBOX1O75936 387 aa15.31■□□□□ 0.04
TGFA-208ENST00000460808 GRIPAP1Q4V328 841 aa15.31■□□□□ 0.04
TGFA-208ENST00000460808 RTFDC1Q9BY42 306 aaPredicted RBP15.31■□□□□ 0.04
TGFA-208ENST00000460808 ZNF277Q9NRM2 450 aaPredicted RBP15.31■□□□□ 0.04
TGFA-208ENST00000460808 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
TGFA-208ENST00000460808 SCN4AP35499 1836 aa15.31■□□□□ 0.04
TGFA-208ENST00000460808 NEURL1BA8MQ27 555 aa15.3■□□□□ 0.04
TGFA-208ENST00000460808 FZD9O00144 591 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms