RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
VBP1-202ENST00000460509 BRD7Q9NPI1 651 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 STK17AQ9UEE5 414 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 DMGDHQ9UI17 866 aaKnown RBP8.32□□□□□ -1.08
VBP1-202ENST00000460509 PCDHGC4Q9Y5F7 938 aa8.32□□□□□ -1.08
VBP1-202ENST00000460509 THBS1P07996 1170 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 GMPRP36959 345 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 TYRO3Q06418 890 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 SV2AQ7L0J3 742 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 ABHD17AQ96GS6 310 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 POLIQ9UNA4 740 aa8.31□□□□□ -1.08
VBP1-202ENST00000460509 OPLAHO14841 1288 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 FZD6O60353 706 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 EPB42P16452 691 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 PCSK2P16519 638 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 INPP5BP32019 993 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 TRERF1Q96PN7 1200 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 DCTN4Q9UJW0 460 aa8.3□□□□□ -1.08
VBP1-202ENST00000460509 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
VBP1-202ENST00000460509 BNIP3LO60238 219 aa8.29□□□□□ -1.08
VBP1-202ENST00000460509 MAPTP10636 758 aaKnown RBP8.29□□□□□ -1.08
VBP1-202ENST00000460509 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
VBP1-202ENST00000460509 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
VBP1-202ENST00000460509 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
VBP1-202ENST00000460509 H3BM21 787 aa8.28□□□□□ -1.08
VBP1-202ENST00000460509 PDGFAP04085 211 aa8.28□□□□□ -1.08
VBP1-202ENST00000460509 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
VBP1-202ENST00000460509 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
VBP1-202ENST00000460509 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
VBP1-202ENST00000460509 KCNH4Q9UQ05 1017 aa8.28□□□□□ -1.08
VBP1-202ENST00000460509 FAM157BP0CG42 384 aa8.27□□□□□ -1.09
VBP1-202ENST00000460509 TNP2Q05952 138 aa8.27□□□□□ -1.09
VBP1-202ENST00000460509 UBAP2LQ14157 1087 aaKnown RBP8.27□□□□□ -1.09
VBP1-202ENST00000460509 NPAS3Q8IXF0 933 aa8.27□□□□□ -1.09
VBP1-202ENST00000460509 IRF7Q92985 503 aa8.27□□□□□ -1.09
VBP1-202ENST00000460509 A6NHS1 94 aa8.26□□□□□ -1.09
VBP1-202ENST00000460509 UBAP1LF5GYI3 381 aa8.26□□□□□ -1.09
VBP1-202ENST00000460509 CD33P20138 364 aa8.26□□□□□ -1.09
VBP1-202ENST00000460509 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
VBP1-202ENST00000460509 STRN4Q9NRL3 753 aa8.26□□□□□ -1.09
VBP1-202ENST00000460509 MARK1Q9P0L2 795 aa8.26□□□□□ -1.09
VBP1-202ENST00000460509 ATXN7L1Q9ULK2 861 aaPredicted RBP8.26□□□□□ -1.09
VBP1-202ENST00000460509 FNDC3AQ9Y2H6 1198 aaKnown RBP8.26□□□□□ -1.09
VBP1-202ENST00000460509 XYLBO75191 536 aa8.25□□□□□ -1.09
VBP1-202ENST00000460509 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
VBP1-202ENST00000460509 USP5P45974 858 aa8.25□□□□□ -1.09
VBP1-202ENST00000460509 KRT25Q7Z3Z0 450 aa8.25□□□□□ -1.09
VBP1-202ENST00000460509 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
VBP1-202ENST00000460509 FGFR3P22607 806 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
VBP1-202ENST00000460509 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 NDFIP2Q9NV92 336 aa8.24□□□□□ -1.09
VBP1-202ENST00000460509 EFSO43281 561 aa8.23□□□□□ -1.09
VBP1-202ENST00000460509 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
VBP1-202ENST00000460509 GRNP28799 593 aaKnown RBP8.23□□□□□ -1.09
VBP1-202ENST00000460509 TMC7Q7Z402 723 aa8.23□□□□□ -1.09
VBP1-202ENST00000460509 ZNF438Q7Z4V0 828 aa8.23□□□□□ -1.09
VBP1-202ENST00000460509 RAB44Q7Z6P3 723 aaPredicted RBP8.23□□□□□ -1.09
VBP1-202ENST00000460509 PRR12Q9ULL5 1215 aa8.23□□□□□ -1.09
VBP1-202ENST00000460509 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
VBP1-202ENST00000460509 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 SASH3O75995 380 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 CTBSQ01459 385 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 SPEM2Q0P670 501 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 CCINQ13939 588 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 TRIP4Q15650 581 aaPredicted RBP8.22□□□□□ -1.09
VBP1-202ENST00000460509 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
VBP1-202ENST00000460509 ASB16Q96NS5 453 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 RBCK1Q9BYM8 510 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 NIF3L1Q9GZT8 377 aa8.22□□□□□ -1.09
VBP1-202ENST00000460509 BMP4P12644 408 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 MX2P20592 715 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
VBP1-202ENST00000460509 KCNQ4P56696 695 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 EHHADHQ08426 723 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 GJD3Q8N144 294 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 ZSCAN1Q8NBB4 408 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 BHMTQ93088 406 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 SLC30A3Q99726 388 aa8.21□□□□□ -1.1
VBP1-202ENST00000460509 DMRTB1Q96MA1 342 aa8.2□□□□□ -1.1
VBP1-202ENST00000460509 GSX2Q9BZM3 304 aa8.2□□□□□ -1.1
VBP1-202ENST00000460509 IGFLR1Q9H665 355 aa8.2□□□□□ -1.1
VBP1-202ENST00000460509 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
VBP1-202ENST00000460509 RARAP10276 462 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 NFKB1P19838 968 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 PLCB3Q01970 1234 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 DNAJC14Q6Y2X3 702 aaPredicted RBP8.19□□□□□ -1.1
VBP1-202ENST00000460509 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
VBP1-202ENST00000460509 GPR182O15218 404 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms