RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 UTP14AQ9BVJ6 771 aaKnown RBP22.83■■□□□ 1.25
PLOD3-209ENST00000460475 ABCC12Q96J65 1359 aa22.83■■□□□ 1.25
PLOD3-209ENST00000460475 DDX58O95786 925 aaKnown RBP22.82■■□□□ 1.24
PLOD3-209ENST00000460475 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
PLOD3-209ENST00000460475 RIC3Q7Z5B4 369 aa22.82■■□□□ 1.24
PLOD3-209ENST00000460475 TRMT2AQ8IZ69 625 aaKnown RBP22.82■■□□□ 1.24
PLOD3-209ENST00000460475 MASTLQ96GX5 879 aa22.82■■□□□ 1.24
PLOD3-209ENST00000460475 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
PLOD3-209ENST00000460475 YY1P25490 414 aa22.81■■□□□ 1.24
PLOD3-209ENST00000460475 CRY2Q49AN0 593 aa22.81■■□□□ 1.24
PLOD3-209ENST00000460475 NPR1P16066 1061 aa22.8■■□□□ 1.24
PLOD3-209ENST00000460475 KSR2Q6VAB6 950 aa22.8■■□□□ 1.24
PLOD3-209ENST00000460475 G2E3Q7L622 706 aa22.8■■□□□ 1.24
PLOD3-209ENST00000460475 CNKSR1Q969H4 720 aa22.8■■□□□ 1.24
PLOD3-209ENST00000460475 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
PLOD3-209ENST00000460475 TNRC6CQ9HCJ0 1690 aaKnown RBP22.8■■□□□ 1.24
PLOD3-209ENST00000460475 CDCA7LQ96GN5 454 aa22.79■■□□□ 1.24
PLOD3-209ENST00000460475 METTL22Q9BUU2 404 aaPredicted RBP22.79■■□□□ 1.24
PLOD3-209ENST00000460475 SLX4Q8IY92 1834 aa22.78■■□□□ 1.24
PLOD3-209ENST00000460475 ATP5J2-PTCD1G3V325 749 aa22.78■■□□□ 1.24
PLOD3-209ENST00000460475 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
PLOD3-209ENST00000460475 ADCY9O60503 1353 aa22.77■■□□□ 1.24
PLOD3-209ENST00000460475 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
PLOD3-209ENST00000460475 FLIIQ13045 1269 aa22.77■■□□□ 1.24
PLOD3-209ENST00000460475 PI4KAP1Q8N8J0 262 aa22.77■■□□□ 1.24
PLOD3-209ENST00000460475 SH3TC1Q8TE82 1336 aa22.77■■□□□ 1.24
PLOD3-209ENST00000460475 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
PLOD3-209ENST00000460475 ARHGAP27Q6ZUM4 889 aa22.76■■□□□ 1.23
PLOD3-209ENST00000460475 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
PLOD3-209ENST00000460475 CCDC191Q8NCU4 936 aa22.75■■□□□ 1.23
PLOD3-209ENST00000460475 MYD88Q99836 296 aa22.75■■□□□ 1.23
PLOD3-209ENST00000460475 CACNA1SQ13698 1873 aa22.75■■□□□ 1.23
PLOD3-209ENST00000460475 ALDH1B1P30837 517 aa22.74■■□□□ 1.23
PLOD3-209ENST00000460475 PRPF40BQ6NWY9 871 aaKnown RBP22.74■■□□□ 1.23
PLOD3-209ENST00000460475 SYNE4Q8N205 404 aa22.74■■□□□ 1.23
PLOD3-209ENST00000460475 C7orf43Q8WVR3 580 aa22.74■■□□□ 1.23
PLOD3-209ENST00000460475 ZNF428Q96B54 188 aa22.74■■□□□ 1.23
PLOD3-209ENST00000460475 NLRP3Q96P20 1036 aa22.74■■□□□ 1.23
PLOD3-209ENST00000460475 SBF1O95248 1867 aa22.73■■□□□ 1.23
PLOD3-209ENST00000460475 C3orf67Q6ZVT6 689 aa22.73■■□□□ 1.23
PLOD3-209ENST00000460475 LAMB2P55268 1798 aa22.72■■□□□ 1.23
PLOD3-209ENST00000460475 IGKV5-2P06315 115 aa22.72■■□□□ 1.23
PLOD3-209ENST00000460475 FAM89AQ96GI7 184 aa22.72■■□□□ 1.23
PLOD3-209ENST00000460475 CRAMP1Q96RY5 1269 aa22.72■■□□□ 1.23
PLOD3-209ENST00000460475 FER1L6Q2WGJ9 1857 aa22.72■■□□□ 1.23
PLOD3-209ENST00000460475 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
PLOD3-209ENST00000460475 HCLS1P14317 486 aaPredicted RBP22.71■■□□□ 1.23
PLOD3-209ENST00000460475 FKBP5Q13451 457 aaPredicted RBP22.71■■□□□ 1.23
PLOD3-209ENST00000460475 ZBTB38Q8NAP3 1195 aaPredicted RBP22.71■■□□□ 1.23
PLOD3-209ENST00000460475 CWC25Q9NXE8 425 aaPredicted RBP22.71■■□□□ 1.23
PLOD3-209ENST00000460475 C21orf2O43822 256 aa22.7■■□□□ 1.22
PLOD3-209ENST00000460475 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.22
PLOD3-209ENST00000460475 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
PLOD3-209ENST00000460475 NEXNQ0ZGT2 675 aa22.7■■□□□ 1.22
PLOD3-209ENST00000460475 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
PLOD3-209ENST00000460475 RPGRQ92834 1020 aaKnown RBP22.7■■□□□ 1.22
PLOD3-209ENST00000460475 PCCAP05165 728 aaPredicted RBP22.69■■□□□ 1.22
PLOD3-209ENST00000460475 DNAAF4Q8WXU2 420 aa22.69■■□□□ 1.22
PLOD3-209ENST00000460475 RBM17Q96I25 401 aaKnown RBP22.69■■□□□ 1.22
PLOD3-209ENST00000460475 NFKBIEO00221 500 aa22.68■■□□□ 1.22
PLOD3-209ENST00000460475 NEURL1BA8MQ27 555 aa22.67■■□□□ 1.22
PLOD3-209ENST00000460475 IRS4O14654 1257 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-209ENST00000460475 SF3B3Q15393 1217 aaKnown RBP22.67■■□□□ 1.22
PLOD3-209ENST00000460475 ALDH1L2Q3SY69 923 aa22.67■■□□□ 1.22
PLOD3-209ENST00000460475 MRPL50Q8N5N7 158 aaKnown RBP22.67■■□□□ 1.22
PLOD3-209ENST00000460475 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
PLOD3-209ENST00000460475 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
PLOD3-209ENST00000460475 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
PLOD3-209ENST00000460475 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
PLOD3-209ENST00000460475 ZNF784Q8NCA9 323 aaPredicted RBP22.66■■□□□ 1.22
PLOD3-209ENST00000460475 ZNF219Q9P2Y4 722 aaPredicted RBP22.66■■□□□ 1.22
PLOD3-209ENST00000460475 CCDC88AQ3V6T2 1871 aa22.66■■□□□ 1.22
PLOD3-209ENST00000460475 CDHR2Q9BYE9 1310 aa22.65■■□□□ 1.22
PLOD3-209ENST00000460475 CWF19L2Q2TBE0 894 aaKnown RBP22.65■■□□□ 1.22
PLOD3-209ENST00000460475 PRELPP51888 382 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 RASSF7Q02833 373 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 CCDC93Q567U6 631 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
PLOD3-209ENST00000460475 C9orf131Q5VYM1 1079 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 CC2D2BQ6DHV5 1058 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 SNED1Q8TER0 1413 aa22.64■■□□□ 1.21
PLOD3-209ENST00000460475 ABCC4O15439 1325 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 F6X3S4 739 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 H7C1W4 665 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 LMNB1P20700 586 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 GCKRQ14397 625 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
PLOD3-209ENST00000460475 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
PLOD3-209ENST00000460475 BBOX1O75936 387 aa22.62■■□□□ 1.21
PLOD3-209ENST00000460475 DDX46Q7L014 1031 aaKnown RBP22.62■■□□□ 1.21
PLOD3-209ENST00000460475 RTKN2Q8IZC4 609 aa22.62■■□□□ 1.21
PLOD3-209ENST00000460475 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
PLOD3-209ENST00000460475 DICER1Q9UPY3 1922 aaKnown RBP22.62■■□□□ 1.21
PLOD3-209ENST00000460475 TAF1P21675 1872 aa22.62■■□□□ 1.21
PLOD3-209ENST00000460475 PTPRCP08575 1304 aa22.61■■□□□ 1.21
PLOD3-209ENST00000460475 PDE8AO60658 829 aa22.61■■□□□ 1.21
PLOD3-209ENST00000460475 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
PLOD3-209ENST00000460475 GRIPAP1Q4V328 841 aa22.61■■□□□ 1.21
PLOD3-209ENST00000460475 OLFM4Q6UX06 510 aa22.61■■□□□ 1.21
PLOD3-209ENST00000460475 RNF181Q9P0P0 153 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms