RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 GRM8O00222 908 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-206ENST00000460235 TM4SF1P30408 202 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 NFIXQ14938 502 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 AMIGO3Q86WK7 504 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 CNBD1Q8NA66 436 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 PANK1Q8TE04 598 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
HDAC4-206ENST00000460235 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
HDAC4-206ENST00000460235 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
HDAC4-206ENST00000460235 CWF19L2Q2TBE0 894 aaKnown RBP15.49■□□□□ 0.07
HDAC4-206ENST00000460235 ERICH6BQ5W0A0 696 aa15.49■□□□□ 0.07
HDAC4-206ENST00000460235 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
HDAC4-206ENST00000460235 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
HDAC4-206ENST00000460235 SERPINB2P05120 415 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 MMP10P09238 476 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 BCORQ6W2J9 1755 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 ARFGEF2Q9Y6D5 1785 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 C4AP0C0L4 1744 aa15.48■□□□□ 0.07
HDAC4-206ENST00000460235 CDHR2Q9BYE9 1310 aa15.47■□□□□ 0.07
HDAC4-206ENST00000460235 H7C1W4 665 aa15.47■□□□□ 0.07
HDAC4-206ENST00000460235 GNAI2P04899 355 aa15.47■□□□□ 0.07
HDAC4-206ENST00000460235 SUSD4Q5VX71 490 aa15.47■□□□□ 0.07
HDAC4-206ENST00000460235 NUP98P52948 1817 aa15.47■□□□□ 0.07
HDAC4-206ENST00000460235 UTYO14607 1347 aa15.46■□□□□ 0.07
HDAC4-206ENST00000460235 PSDA5PKW4 1024 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-206ENST00000460235 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-206ENST00000460235 RLBP1P12271 317 aa15.46■□□□□ 0.07
HDAC4-206ENST00000460235 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
HDAC4-206ENST00000460235 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
HDAC4-206ENST00000460235 USP44Q9H0E7 712 aa15.46■□□□□ 0.07
HDAC4-206ENST00000460235 UBN2Q6ZU65 1347 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
HDAC4-206ENST00000460235 IRS4O14654 1257 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-206ENST00000460235 PDE8AO60658 829 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 PDE6BP35913 854 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 SLC10A5Q5PT55 438 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
HDAC4-206ENST00000460235 HMMRO75330 724 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 ZBTB7AO95365 584 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 NTSR2O95665 410 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 FAM89AQ96GI7 184 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 PLA2G12BQ9BX93 195 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 TUBGCP6Q96RT7 1819 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 ANKRD36CQ5JPF3 1778 aa15.44■□□□□ 0.06
HDAC4-206ENST00000460235 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
HDAC4-206ENST00000460235 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
HDAC4-206ENST00000460235 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
HDAC4-206ENST00000460235 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
HDAC4-206ENST00000460235 DDR1Q08345 913 aa15.42■□□□□ 0.06
HDAC4-206ENST00000460235 PRR5LQ6MZQ0 368 aa15.42■□□□□ 0.06
HDAC4-206ENST00000460235 MEIS3Q99687 375 aa15.42■□□□□ 0.06
HDAC4-206ENST00000460235 ZBTB40Q9NUA8 1239 aa15.42■□□□□ 0.06
HDAC4-206ENST00000460235 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
HDAC4-206ENST00000460235 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
HDAC4-206ENST00000460235 NBPF7P0C2Y1 421 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-206ENST00000460235 ERFEQ4G0M1 354 aa15.41■□□□□ 0.06
HDAC4-206ENST00000460235 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
HDAC4-206ENST00000460235 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
HDAC4-206ENST00000460235 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
HDAC4-206ENST00000460235 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-206ENST00000460235 NUTM1Q86Y26 1132 aa15.4■□□□□ 0.06
HDAC4-206ENST00000460235 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
HDAC4-206ENST00000460235 PDGFDQ9GZP0 370 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-206ENST00000460235 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
HDAC4-206ENST00000460235 H0YIN7 160 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CASP7P55210 303 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CTSWP56202 376 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 SF3B3Q15393 1217 aaKnown RBP15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
HDAC4-206ENST00000460235 PPP1R1BQ9UD71 204 aaPredicted RBP15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
HDAC4-206ENST00000460235 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
HDAC4-206ENST00000460235 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
HDAC4-206ENST00000460235 TGFB2P61812 414 aa15.38■□□□□ 0.05
HDAC4-206ENST00000460235 IFIT5Q13325 482 aaKnown RBP15.38■□□□□ 0.05
HDAC4-206ENST00000460235 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
HDAC4-206ENST00000460235 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
HDAC4-206ENST00000460235 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
HDAC4-206ENST00000460235 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 CSF1RP07333 972 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 ATP8B2P98198 1209 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 MTX1Q13505 466 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-206ENST00000460235 HSP90AB4PQ58FF6 505 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 EXOC6Q8TAG9 804 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
HDAC4-206ENST00000460235 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
HDAC4-206ENST00000460235 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms