RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 MEGF6O75095 1541 aa21.82■■□□□ 1.08
HPS3-202ENST00000460120 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
HPS3-202ENST00000460120 ANKRD13DQ6ZTN6 518 aa21.81■■□□□ 1.08
HPS3-202ENST00000460120 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
HPS3-202ENST00000460120 TAF6LQ9Y6J9 622 aa21.81■■□□□ 1.08
HPS3-202ENST00000460120 TMEM94Q12767 1356 aa21.81■■□□□ 1.08
HPS3-202ENST00000460120 FIBPO43427 364 aa21.8■■□□□ 1.08
HPS3-202ENST00000460120 SYT1P21579 422 aa21.8■■□□□ 1.08
HPS3-202ENST00000460120 CABP4P57796 275 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 LRSAM1Q6UWE0 723 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 CCDC171Q6TFL3 1326 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 MBD3O95983 291 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 GJB2P29033 226 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 DNAJC2Q99543 621 aaKnown RBP21.79■■□□□ 1.08
HPS3-202ENST00000460120 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
HPS3-202ENST00000460120 CYP46A1Q9Y6A2 500 aa21.79■■□□□ 1.08
HPS3-202ENST00000460120 ZNF142P52746 1687 aaPredicted RBP21.78■■□□□ 1.08
HPS3-202ENST00000460120 VPS37CA5D8V6 355 aaPredicted RBP21.78■■□□□ 1.08
HPS3-202ENST00000460120 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
HPS3-202ENST00000460120 STX6O43752 255 aa21.78■■□□□ 1.08
HPS3-202ENST00000460120 TFCP2Q12800 502 aa21.78■■□□□ 1.08
HPS3-202ENST00000460120 MPNDQ8N594 471 aa21.78■■□□□ 1.08
HPS3-202ENST00000460120 A0A087WZG4 1122 aa21.77■■□□□ 1.08
HPS3-202ENST00000460120 SNRPA1P09661 255 aaKnown RBP21.77■■□□□ 1.08
HPS3-202ENST00000460120 ZKSCAN1P17029 563 aaPredicted RBP21.77■■□□□ 1.08
HPS3-202ENST00000460120 ZNF589Q86UQ0 364 aaPredicted RBP21.77■■□□□ 1.08
HPS3-202ENST00000460120 PPP1R9BQ96SB3 815 aa21.77■■□□□ 1.08
HPS3-202ENST00000460120 ZSCAN22P10073 491 aaPredicted RBP21.77■■□□□ 1.07
HPS3-202ENST00000460120 PKNOX2Q96KN3 472 aa21.77■■□□□ 1.07
HPS3-202ENST00000460120 HSPA2P54652 639 aa21.76■■□□□ 1.07
HPS3-202ENST00000460120 STK3Q13188 491 aa21.76■■□□□ 1.07
HPS3-202ENST00000460120 ZNF330Q9Y3S2 320 aaPredicted RBP21.76■■□□□ 1.07
HPS3-202ENST00000460120 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.76■■□□□ 1.07
HPS3-202ENST00000460120 ME3Q16798 604 aa21.76■■□□□ 1.07
HPS3-202ENST00000460120 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
HPS3-202ENST00000460120 PHRF1Q9P1Y6 1649 aaKnown RBP21.75■■□□□ 1.07
HPS3-202ENST00000460120 NECTIN1Q15223 517 aa21.75■■□□□ 1.07
HPS3-202ENST00000460120 CCDC129Q6ZRS4 1044 aa21.75■■□□□ 1.07
HPS3-202ENST00000460120 FMNL2Q96PY5 1086 aa21.75■■□□□ 1.07
HPS3-202ENST00000460120 UTYO14607 1347 aa21.75■■□□□ 1.07
HPS3-202ENST00000460120 TRPM3Q9HCF6 1732 aaPredicted RBP21.74■■□□□ 1.07
HPS3-202ENST00000460120 OVOS2A0A0G2JMS6 1433 aa21.74■■□□□ 1.07
HPS3-202ENST00000460120 SLC27A2O14975 620 aa21.74■■□□□ 1.07
HPS3-202ENST00000460120 FERMT3Q86UX7 667 aa21.74■■□□□ 1.07
HPS3-202ENST00000460120 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
HPS3-202ENST00000460120 TPCN1Q9ULQ1 816 aa21.74■■□□□ 1.07
HPS3-202ENST00000460120 SLFNL1Q499Z3 407 aa21.73■■□□□ 1.07
HPS3-202ENST00000460120 DBNLQ9UJU6 430 aaKnown RBP21.73■■□□□ 1.07
HPS3-202ENST00000460120 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
HPS3-202ENST00000460120 ST3GAL1Q11201 340 aa21.73■■□□□ 1.07
HPS3-202ENST00000460120 SEC62Q99442 399 aaKnown RBP21.73■■□□□ 1.07
HPS3-202ENST00000460120 ZSWIM6Q9HCJ5 1215 aa21.73■■□□□ 1.07
HPS3-202ENST00000460120 DNM1Q05193 864 aaKnown RBP21.72■■□□□ 1.07
HPS3-202ENST00000460120 DBNDD2Q9BQY9 259 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 F13A1P00488 732 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 MSNP26038 577 aaKnown RBP21.72■■□□□ 1.07
HPS3-202ENST00000460120 VPS53Q5VIR6 699 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 FAM173BQ6P4H8 233 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 DDX46Q7L014 1031 aaKnown RBP21.72■■□□□ 1.07
HPS3-202ENST00000460120 TSPY26PQ9H489 355 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 C5P01031 1676 aa21.72■■□□□ 1.07
HPS3-202ENST00000460120 PTPN12Q05209 780 aaKnown RBP21.71■■□□□ 1.07
HPS3-202ENST00000460120 LMBR1LQ6UX01 489 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 MAP4K1Q92918 833 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 NEUROD6Q96NK8 337 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 ZBTB3Q9H5J0 574 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 ADAMTSL3P82987 1691 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 MST1RQ04912 1400 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 TNNI3KQ59H18 835 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 TOM1L2Q6ZVM7 507 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 LRP10Q7Z4F1 713 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 FPGT-TNNI3KV9GXZ4 949 aa21.71■■□□□ 1.07
HPS3-202ENST00000460120 TTLL7Q6ZT98 887 aa21.7■■□□□ 1.06
HPS3-202ENST00000460120 ZSCAN30Q86W11 494 aa21.7■■□□□ 1.06
HPS3-202ENST00000460120 SYAP1Q96A49 352 aaPredicted RBP21.7■■□□□ 1.06
HPS3-202ENST00000460120 A1BGP04217 495 aa21.7■■□□□ 1.06
HPS3-202ENST00000460120 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
HPS3-202ENST00000460120 CCDC85AQ96PX6 553 aaPredicted RBP21.68■■□□□ 1.06
HPS3-202ENST00000460120 PRDM11Q9NQV5 511 aa21.68■■□□□ 1.06
HPS3-202ENST00000460120 HIP1O00291 1037 aa21.68■■□□□ 1.06
HPS3-202ENST00000460120 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
HPS3-202ENST00000460120 LRRC2Q9BYS8 371 aa21.68■■□□□ 1.06
HPS3-202ENST00000460120 STRN4Q9NRL3 753 aa21.68■■□□□ 1.06
HPS3-202ENST00000460120 MTMR6Q9Y217 621 aa21.68■■□□□ 1.06
HPS3-202ENST00000460120 NBPF26B4DH59 902 aa21.67■■□□□ 1.06
HPS3-202ENST00000460120 NBPF14Q5TI25 921 aa21.67■■□□□ 1.06
HPS3-202ENST00000460120 NBPF10Q6P3W6 841 aaKnown RBP21.67■■□□□ 1.06
HPS3-202ENST00000460120 NBPF15Q8N660 670 aa21.67■■□□□ 1.06
HPS3-202ENST00000460120 ZNF594Q96JF6 807 aaPredicted RBP21.67■■□□□ 1.06
HPS3-202ENST00000460120 SIPA1L3O60292 1781 aaPredicted RBP21.66■■□□□ 1.06
HPS3-202ENST00000460120 PLCB2Q00722 1185 aa21.66■■□□□ 1.06
HPS3-202ENST00000460120 LARP1BQ659C4 914 aaKnown RBP21.66■■□□□ 1.06
HPS3-202ENST00000460120 PPFIA3O75145 1194 aa21.66■■□□□ 1.06
HPS3-202ENST00000460120 FOSBP53539 338 aa21.66■■□□□ 1.06
HPS3-202ENST00000460120 TIMM10P62072 90 aa21.65■■□□□ 1.06
HPS3-202ENST00000460120 CDC37L1Q7L3B6 337 aa21.65■■□□□ 1.06
HPS3-202ENST00000460120 COPRSQ9NQ92 184 aa21.65■■□□□ 1.06
HPS3-202ENST00000460120 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
HPS3-202ENST00000460120 RNF20Q5VTR2 975 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms