RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 GOLIM4O00461 696 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 PHF14O94880 888 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 FAM227BQ96M60 508 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 USP21Q9UK80 565 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 OVOS2A0A0G2JMS6 1433 aa11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
NUDCD3-203ENST00000460110 CHGBP05060 677 aa11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 HSP90AB3PQ58FF7 597 aa11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 IL25Q9H293 177 aa11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-203ENST00000460110 LOC102724428A0A0B4J2F2 783 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 SIK1P57059 783 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 SNAP23O00161 211 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
NUDCD3-203ENST00000460110 ZKSCAN1P17029 563 aaPredicted RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 TTC39AQ5SRH9 613 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 PTF1AQ7RTS3 328 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 PPFIA3O75145 1194 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 OSBPL3Q9H4L5 887 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 SEC62Q99442 399 aaKnown RBP11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 KIF2CQ99661 725 aa11.28□□□□□ -0.6
NUDCD3-203ENST00000460110 APPP05067 770 aa11.27□□□□□ -0.6
NUDCD3-203ENST00000460110 SSFA2P28290 1259 aa11.27□□□□□ -0.6
NUDCD3-203ENST00000460110 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.6
NUDCD3-203ENST00000460110 STAP2Q9UGK3 403 aa11.27□□□□□ -0.6
NUDCD3-203ENST00000460110 STK3Q13188 491 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 A0A1B0GUL7 405 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 GOLGA6L22H0YM25 854 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 CYP19A1P11511 503 aaPredicted RBP11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 ITGA6P23229 1130 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 FOSBP53539 338 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 PTH1RQ03431 593 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 GREM2Q9H772 168 aa11.27□□□□□ -0.61
NUDCD3-203ENST00000460110 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 EYA2O00167 538 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 TAF5LO75529 589 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 IDH1O75874 414 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 MTX1Q13505 466 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 H7C1W4 665 aa11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
NUDCD3-203ENST00000460110 TTC41PQ6P2S7 1318 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 SGSM2O43147 1006 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 MCTP1Q6DN14 999 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 PI16Q6UXB8 463 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 ADORA1P30542 326 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
NUDCD3-203ENST00000460110 GNPATO15228 680 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 GSE1Q14687 1217 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 LRP10Q7Z4F1 713 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 KDM4AO75164 1064 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 HSPA1LP34931 641 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 FOXO4P98177 505 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 MCM4P33991 863 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 ITPK1Q13572 414 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 PKP1Q13835 747 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 CDCA7Q9BWT1 371 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
NUDCD3-203ENST00000460110 TRPM3Q9HCF6 1732 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms