RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
SHANK2-213ENST00000460048 HYPKQ9NX55 129 aa21.38■■□□□ 1.01
SHANK2-213ENST00000460048 ZC3H4Q9UPT8 1303 aaKnown RBP21.37■■□□□ 1.01
SHANK2-213ENST00000460048 ELL2O00472 640 aaPredicted RBP21.37■■□□□ 1.01
SHANK2-213ENST00000460048 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
SHANK2-213ENST00000460048 IL16Q14005 1332 aa21.36■■□□□ 1.01
SHANK2-213ENST00000460048 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
SHANK2-213ENST00000460048 SOGA3Q5TF21 947 aa21.36■■□□□ 1.01
SHANK2-213ENST00000460048 NLRP10Q86W26 655 aa21.36■■□□□ 1.01
SHANK2-213ENST00000460048 UTP14AQ9BVJ6 771 aaKnown RBP21.36■■□□□ 1.01
SHANK2-213ENST00000460048 RNF123Q5XPI4 1314 aa21.35■■□□□ 1.01
SHANK2-213ENST00000460048 SLC10A5Q5PT55 438 aa21.35■■□□□ 1.01
SHANK2-213ENST00000460048 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
SHANK2-213ENST00000460048 DDX60Q8IY21 1712 aaKnown RBP21.35■■□□□ 1.01
SHANK2-213ENST00000460048 HOXA10P31260 410 aaPredicted RBP21.34■■□□□ 1.01
SHANK2-213ENST00000460048 TSPYL6Q8N831 410 aa21.34■■□□□ 1.01
SHANK2-213ENST00000460048 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
SHANK2-213ENST00000460048 CCDC93Q567U6 631 aa21.33■■□□□ 1.01
SHANK2-213ENST00000460048 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
SHANK2-213ENST00000460048 NMRK2Q9NPI5 230 aa21.33■■□□□ 1.01
SHANK2-213ENST00000460048 CACNA1FO60840 1977 aa21.33■■□□□ 1.01
SHANK2-213ENST00000460048 SNED1Q8TER0 1413 aa21.32■■□□□ 1
SHANK2-213ENST00000460048 C3orf67Q6ZVT6 689 aa21.32■■□□□ 1
SHANK2-213ENST00000460048 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
SHANK2-213ENST00000460048 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
SHANK2-213ENST00000460048 KDM2BQ8NHM5 1336 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 RPGRQ92834 1020 aaKnown RBP21.31■■□□□ 1
SHANK2-213ENST00000460048 NLRP3Q96P20 1036 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 CRAMP1Q96RY5 1269 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
SHANK2-213ENST00000460048 OLFM4Q6UX06 510 aa21.3■■□□□ 1
SHANK2-213ENST00000460048 WDR63Q8IWG1 891 aa21.3■■□□□ 1
SHANK2-213ENST00000460048 SYNE4Q8N205 404 aa21.3■■□□□ 1
SHANK2-213ENST00000460048 TAF1P21675 1872 aa21.3■■□□□ 1
SHANK2-213ENST00000460048 RBM17Q96I25 401 aaKnown RBP21.29■■□□□ 1
SHANK2-213ENST00000460048 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
SHANK2-213ENST00000460048 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
SHANK2-213ENST00000460048 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
SHANK2-213ENST00000460048 GLTPD2A6NH11 291 aa21.28■■□□□ 1
SHANK2-213ENST00000460048 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
SHANK2-213ENST00000460048 TRIM28Q13263 835 aaKnown RBP21.28■■□□□ 1
SHANK2-213ENST00000460048 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
SHANK2-213ENST00000460048 WDR90Q96KV7 1748 aa21.28■■□□□ 1
SHANK2-213ENST00000460048 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
SHANK2-213ENST00000460048 GOLGA2Q08379 1002 aa21.27■■□□□ 1
SHANK2-213ENST00000460048 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
SHANK2-213ENST00000460048 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
SHANK2-213ENST00000460048 FANCIQ9NVI1 1328 aa21.27■□□□□ 0.99
SHANK2-213ENST00000460048 TOMM70O94826 608 aa21.26■□□□□ 0.99
SHANK2-213ENST00000460048 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
SHANK2-213ENST00000460048 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
SHANK2-213ENST00000460048 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
SHANK2-213ENST00000460048 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
SHANK2-213ENST00000460048 ZNF428Q96B54 188 aa21.24■□□□□ 0.99
SHANK2-213ENST00000460048 PSMD1Q99460 953 aa21.24■□□□□ 0.99
SHANK2-213ENST00000460048 ABCC4O15439 1325 aa21.24■□□□□ 0.99
SHANK2-213ENST00000460048 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
SHANK2-213ENST00000460048 SLC51AQ86UW1 340 aa21.23■□□□□ 0.99
SHANK2-213ENST00000460048 FAM89AQ96GI7 184 aa21.23■□□□□ 0.99
SHANK2-213ENST00000460048 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
SHANK2-213ENST00000460048 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
SHANK2-213ENST00000460048 DDX58O95786 925 aaKnown RBP21.22■□□□□ 0.99
SHANK2-213ENST00000460048 GRIPAP1Q4V328 841 aa21.22■□□□□ 0.99
SHANK2-213ENST00000460048 MYD88Q99836 296 aa21.22■□□□□ 0.99
SHANK2-213ENST00000460048 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
SHANK2-213ENST00000460048 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
SHANK2-213ENST00000460048 LRRC37AA6NMS7 1700 aa21.21■□□□□ 0.99
SHANK2-213ENST00000460048 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
SHANK2-213ENST00000460048 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
SHANK2-213ENST00000460048 ATP6V0A2Q9Y487 856 aa21.21■□□□□ 0.99
SHANK2-213ENST00000460048 POTECB2RU33 542 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 VAMP4O75379 141 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 IARSP41252 1262 aaKnown RBP21.2■□□□□ 0.98
SHANK2-213ENST00000460048 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
SHANK2-213ENST00000460048 SF3B3Q15393 1217 aaKnown RBP21.2■□□□□ 0.98
SHANK2-213ENST00000460048 KSR2Q6VAB6 950 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 CCDC191Q8NCU4 936 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 ZNF521Q96K83 1311 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 SCN4AP35499 1836 aa21.2■□□□□ 0.98
SHANK2-213ENST00000460048 COL4A5P29400 1685 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 BBOX1O75936 387 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 VEGFAP15692 232 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-213ENST00000460048 HSPA6P17066 643 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
SHANK2-213ENST00000460048 G2E3Q7L622 706 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 C16orf71Q8IYS4 520 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-213ENST00000460048 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
SHANK2-213ENST00000460048 MAP3K2Q9Y2U5 619 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 MYH3P11055 1940 aa21.19■□□□□ 0.98
SHANK2-213ENST00000460048 COL4A1P02462 1669 aa21.18■□□□□ 0.98
SHANK2-213ENST00000460048 PI4KAP2A4QPH2 592 aa21.18■□□□□ 0.98
SHANK2-213ENST00000460048 GRAPQ13588 217 aa21.18■□□□□ 0.98
SHANK2-213ENST00000460048 RTL5Q5HYW3 569 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-213ENST00000460048 PI4KAP1Q8N8J0 262 aa21.18■□□□□ 0.98
SHANK2-213ENST00000460048 GRAPLQ8TC17 118 aaPredicted RBP21.18■□□□□ 0.98
SHANK2-213ENST00000460048 IRS4O14654 1257 aaPredicted RBP21.17■□□□□ 0.98
SHANK2-213ENST00000460048 DDNO94850 711 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms