RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
SRM-202ENST00000459997 DUSP27Q5VZP5 1158 aa27.16■■□□□ 1.94
SRM-202ENST00000459997 RBM46Q8TBY0 533 aaKnown RBP27.16■■□□□ 1.94
SRM-202ENST00000459997 RPGRQ92834 1020 aaKnown RBP27.16■■□□□ 1.94
SRM-202ENST00000459997 IFT57Q9NWB7 429 aa27.16■■□□□ 1.94
SRM-202ENST00000459997 GNAI1P63096 354 aa27.15■■□□□ 1.94
SRM-202ENST00000459997 HSP90AB3PQ58FF7 597 aa27.15■■□□□ 1.94
SRM-202ENST00000459997 OLFM4Q6UX06 510 aa27.15■■□□□ 1.94
SRM-202ENST00000459997 UTP14AQ9BVJ6 771 aaKnown RBP27.15■■□□□ 1.94
SRM-202ENST00000459997 DBF4Q9UBU7 674 aaPredicted RBP27.14■■□□□ 1.94
SRM-202ENST00000459997 DPY19L2Q6NUT2 758 aa27.13■■□□□ 1.93
SRM-202ENST00000459997 ANP32CO43423 234 aa27.12■■□□□ 1.93
SRM-202ENST00000459997 FKBP4Q02790 459 aaKnown RBP eCLIP27.12■■□□□ 1.93
SRM-202ENST00000459997 RTKN2Q8IZC4 609 aa27.12■■□□□ 1.93
SRM-202ENST00000459997 VEGFAP15692 232 aaPredicted RBP27.11■■□□□ 1.93
SRM-202ENST00000459997 HOXA10P31260 410 aaPredicted RBP27.11■■□□□ 1.93
SRM-202ENST00000459997 TCIRG1Q13488 830 aa27.11■■□□□ 1.93
SRM-202ENST00000459997 C3orf67Q6ZVT6 689 aa27.11■■□□□ 1.93
SRM-202ENST00000459997 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
SRM-202ENST00000459997 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
SRM-202ENST00000459997 RBM17Q96I25 401 aaKnown RBP27.1■■□□□ 1.93
SRM-202ENST00000459997 NLRP3Q96P20 1036 aa27.1■■□□□ 1.93
SRM-202ENST00000459997 MRS2Q9HD23 443 aa27.1■■□□□ 1.93
SRM-202ENST00000459997 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
SRM-202ENST00000459997 PLBD2Q8NHP8 589 aa27.09■■□□□ 1.93
SRM-202ENST00000459997 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
SRM-202ENST00000459997 HYPKQ9NX55 129 aa27.09■■□□□ 1.93
SRM-202ENST00000459997 ELL2O00472 640 aaPredicted RBP27.08■■□□□ 1.93
SRM-202ENST00000459997 FSTL1Q12841 308 aa27.08■■□□□ 1.93
SRM-202ENST00000459997 SLC10A5Q5PT55 438 aa27.08■■□□□ 1.93
SRM-202ENST00000459997 ANKRD13DQ6ZTN6 518 aa27.08■■□□□ 1.93
SRM-202ENST00000459997 CRAMP1Q96RY5 1269 aa27.08■■□□□ 1.93
SRM-202ENST00000459997 APLP1P51693 650 aa27.07■■□□□ 1.92
SRM-202ENST00000459997 TRMT112Q9UI30 125 aaKnown RBP27.07■■□□□ 1.92
SRM-202ENST00000459997 SNED1Q8TER0 1413 aa27.07■■□□□ 1.92
SRM-202ENST00000459997 LAMB2P55268 1798 aa27.06■■□□□ 1.92
SRM-202ENST00000459997 POTECB2RU33 542 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 PPEF1O14829 653 aaPredicted RBP27.05■■□□□ 1.92
SRM-202ENST00000459997 CC2D2BQ6DHV5 1058 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 SYNE4Q8N205 404 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 C8orf58Q8NAV2 365 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 SMC1BQ8NDV3 1235 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 ZNF428Q96B54 188 aa27.05■■□□□ 1.92
SRM-202ENST00000459997 DDNO94850 711 aaPredicted RBP27.04■■□□□ 1.92
SRM-202ENST00000459997 HCLS1P14317 486 aaPredicted RBP27.04■■□□□ 1.92
SRM-202ENST00000459997 PSMD1Q99460 953 aa27.04■■□□□ 1.92
SRM-202ENST00000459997 SH3TC1Q8TE82 1336 aa27.04■■□□□ 1.92
SRM-202ENST00000459997 TCERG1O14776 1098 aaKnown RBP27.03■■□□□ 1.92
SRM-202ENST00000459997 IARSP41252 1262 aaKnown RBP27.03■■□□□ 1.92
SRM-202ENST00000459997 CCDC27Q2M243 656 aa27.02■■□□□ 1.92
SRM-202ENST00000459997 ATP5J2-PTCD1G3V325 749 aa27.01■■□□□ 1.91
SRM-202ENST00000459997 SLC51AQ86UW1 340 aa27.01■■□□□ 1.91
SRM-202ENST00000459997 WWC1Q8IX03 1113 aa27.01■■□□□ 1.91
SRM-202ENST00000459997 TSR2Q969E8 191 aaKnown RBP27.01■■□□□ 1.91
SRM-202ENST00000459997 ISCA1Q9BUE6 129 aa27.01■■□□□ 1.91
SRM-202ENST00000459997 ABCC4O15439 1325 aa27■■□□□ 1.91
SRM-202ENST00000459997 GOLGA2Q08379 1002 aa27■■□□□ 1.91
SRM-202ENST00000459997 GRIPAP1Q4V328 841 aa27■■□□□ 1.91
SRM-202ENST00000459997 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
SRM-202ENST00000459997 DDX60Q8IY21 1712 aaKnown RBP26.99■■□□□ 1.91
SRM-202ENST00000459997 ZNF541Q9H0D2 1346 aa26.99■■□□□ 1.91
SRM-202ENST00000459997 RIC3Q7Z5B4 369 aa26.99■■□□□ 1.91
SRM-202ENST00000459997 TSPYL6Q8N831 410 aa26.98■■□□□ 1.91
SRM-202ENST00000459997 CHMP4AQ9BY43 222 aa26.98■■□□□ 1.91
SRM-202ENST00000459997 TMX4Q9H1E5 349 aaPredicted RBP26.98■■□□□ 1.91
SRM-202ENST00000459997 CCDC30Q5VVM6 783 aa26.97■■□□□ 1.91
SRM-202ENST00000459997 JDP2Q8WYK2 163 aa26.97■■□□□ 1.91
SRM-202ENST00000459997 ATP6V0A2Q9Y487 856 aa26.97■■□□□ 1.91
SRM-202ENST00000459997 DDX46Q7L014 1031 aaKnown RBP26.96■■□□□ 1.91
SRM-202ENST00000459997 FAM89AQ96GI7 184 aa26.96■■□□□ 1.91
SRM-202ENST00000459997 COL4A5P29400 1685 aa26.95■■□□□ 1.91
SRM-202ENST00000459997 IQCA1LA6NCM1 817 aa26.95■■□□□ 1.9
SRM-202ENST00000459997 FZD9O00144 591 aa26.95■■□□□ 1.9
SRM-202ENST00000459997 L3MBTL3Q96JM7 780 aaPredicted RBP26.95■■□□□ 1.9
SRM-202ENST00000459997 BBOX1O75936 387 aa26.94■■□□□ 1.9
SRM-202ENST00000459997 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
SRM-202ENST00000459997 NCBP3Q53F19 620 aaKnown RBP26.94■■□□□ 1.9
SRM-202ENST00000459997 SCN4AP35499 1836 aa26.94■■□□□ 1.9
SRM-202ENST00000459997 IL16Q14005 1332 aa26.93■■□□□ 1.9
SRM-202ENST00000459997 HTRA3P83110 453 aa26.93■■□□□ 1.9
SRM-202ENST00000459997 RTL5Q5HYW3 569 aaPredicted RBP26.93■■□□□ 1.9
SRM-202ENST00000459997 LARGE2Q8N3Y3 721 aa26.93■■□□□ 1.9
SRM-202ENST00000459997 TAF1P21675 1872 aa26.92■■□□□ 1.9
SRM-202ENST00000459997 GRAPQ13588 217 aa26.92■■□□□ 1.9
SRM-202ENST00000459997 DNAJC5GQ8N7S2 189 aa26.92■■□□□ 1.9
SRM-202ENST00000459997 GRAPLQ8TC17 118 aaPredicted RBP26.92■■□□□ 1.9
SRM-202ENST00000459997 MYD88Q99836 296 aa26.92■■□□□ 1.9
SRM-202ENST00000459997 DDX58O95786 925 aaKnown RBP26.91■■□□□ 1.9
SRM-202ENST00000459997 SP8Q8IXZ3 490 aa26.91■■□□□ 1.9
SRM-202ENST00000459997 SALL2Q9Y467 1007 aaPredicted RBP26.91■■□□□ 1.9
SRM-202ENST00000459997 POTEIP0CG38 1075 aa26.9■■□□□ 1.9
SRM-202ENST00000459997 POTEJP0CG39 1038 aa26.9■■□□□ 1.9
SRM-202ENST00000459997 TWISTNBQ3B726 338 aaPredicted RBP26.9■■□□□ 1.9
SRM-202ENST00000459997 GPC2Q8N158 579 aa26.9■■□□□ 1.9
SRM-202ENST00000459997 STK31Q9BXU1 1019 aa26.9■■□□□ 1.9
SRM-202ENST00000459997 TAF1DQ9H5J8 278 aaPredicted RBP26.9■■□□□ 1.9
SRM-202ENST00000459997 IRS4O14654 1257 aaPredicted RBP26.89■■□□□ 1.9
SRM-202ENST00000459997 PPIP5K2O43314 1243 aa26.89■■□□□ 1.9
SRM-202ENST00000459997 EIF6P56537 245 aaKnown RBP26.89■■□□□ 1.9
SRM-202ENST00000459997 CHADLQ6NUI6 762 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms