RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TXLNAP40222 546 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 CCDC183Q5T5S1 534 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 CRB1P82279 1406 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 IGSF1Q8N6C5 1336 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
UFD1-205ENST00000459854 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 DDX58O95786 925 aaKnown RBP11.43□□□□□ -0.58
UFD1-205ENST00000459854 GNAI3P08754 354 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 TERF1P54274 439 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 MAP3K11Q16584 847 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
UFD1-205ENST00000459854 KIAA1328Q86T90 577 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 CCDC94Q9BW85 323 aaPredicted RBP11.43□□□□□ -0.58
UFD1-205ENST00000459854 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
UFD1-205ENST00000459854 EPS15P42566 896 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 AXIN2Q9Y2T1 843 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 SSH2Q76I76 1423 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 FEZ1Q99689 392 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
UFD1-205ENST00000459854 MAP3K5Q99683 1374 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 CTAGE5O15320 804 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 STIM1Q13586 685 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 STK38Q15208 465 aa11.42□□□□□ -0.58
UFD1-205ENST00000459854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.42□□□□□ -0.58
UFD1-205ENST00000459854 FIBPO43427 364 aa11.41□□□□□ -0.58
UFD1-205ENST00000459854 MCM10Q7L590 875 aa11.41□□□□□ -0.58
UFD1-205ENST00000459854 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
UFD1-205ENST00000459854 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
UFD1-205ENST00000459854 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
UFD1-205ENST00000459854 SFPQP23246 707 aaKnown RBP eCLIP11.41□□□□□ -0.58
UFD1-205ENST00000459854 CCDC171Q6TFL3 1326 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 NFXL1Q6ZNB6 911 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 KRT27Q7Z3Y8 459 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 ERC1Q8IUD2 1116 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 C9orf78Q9NZ63 289 aaPredicted RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 CYP46A1Q9Y6A2 500 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 STARD3NLO95772 234 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 SSR1P43307 286 aaKnown RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 TEX13AQ9BXU3 409 aaPredicted RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 UPF3BQ9BZI7 483 aaKnown RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 CENPHQ9H3R5 247 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 NF2P35240 595 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 SEPT7Q16181 437 aaKnown RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 TMX4Q9H1E5 349 aaPredicted RBP11.4□□□□□ -0.58
UFD1-205ENST00000459854 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
UFD1-205ENST00000459854 AHDC1Q5TGY3 1603 aaPredicted RBP11.4□□□□□ -0.59
UFD1-205ENST00000459854 IMMTQ16891 758 aaKnown RBP11.4□□□□□ -0.59
UFD1-205ENST00000459854 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
UFD1-205ENST00000459854 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
UFD1-205ENST00000459854 FMNL2Q96PY5 1086 aa11.39□□□□□ -0.59
UFD1-205ENST00000459854 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
UFD1-205ENST00000459854 SPATA31A1Q5TZJ5 1347 aa11.39□□□□□ -0.59
UFD1-205ENST00000459854 TNNT1P13805 278 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 CCDC30Q5VVM6 783 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 KIF5CO60282 957 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 CASQ1P31415 396 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 SRRTQ9BXP5 876 aaKnown RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 EPB41L2O43491 1005 aaKnown RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 RBM25P49756 843 aaKnown RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 KLHL40Q2TBA0 621 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 ARHGAP29Q52LW3 1261 aa11.38□□□□□ -0.59
UFD1-205ENST00000459854 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
UFD1-205ENST00000459854 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
UFD1-205ENST00000459854 SART3Q15020 963 aaKnown RBP11.37□□□□□ -0.59
UFD1-205ENST00000459854 SPATA24Q86W54 205 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 SPATA32Q96LK8 384 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 SCAND2PQ9GZW5 306 aaPredicted RBP11.37□□□□□ -0.59
UFD1-205ENST00000459854 ERVV-2B6SEH9 535 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 TUBBP07437 444 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 GTF2F1P35269 517 aaKnown RBP eCLIP11.37□□□□□ -0.59
UFD1-205ENST00000459854 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 IL16Q14005 1332 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
UFD1-205ENST00000459854 PHACTR3Q96KR7 559 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 PHKG2P15735 406 aa11.37□□□□□ -0.59
UFD1-205ENST00000459854 MNAT1P51948 309 aa11.36□□□□□ -0.59
UFD1-205ENST00000459854 KRT32Q14532 448 aa11.36□□□□□ -0.59
UFD1-205ENST00000459854 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
UFD1-205ENST00000459854 ENOX2Q16206 610 aaKnown RBP11.36□□□□□ -0.59
UFD1-205ENST00000459854 CLASRPQ8N2M8 674 aaKnown RBP11.36□□□□□ -0.59
UFD1-205ENST00000459854 KIF20BQ96Q89 1820 aa11.36□□□□□ -0.59
UFD1-205ENST00000459854 SMC1AQ14683 1233 aaKnown RBP11.36□□□□□ -0.59
UFD1-205ENST00000459854 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms