RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	C2CD5	Q86YS7	1000 aa		13.15	□□□□□ -0.3
MRPL55-223	ENST00000459783	RIC1	Q4ADV7	1423 aa		13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	ST5	P78524	1137 aa		13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	FKBP5	Q13451	457 aa	Predicted RBP	13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	CWF19L2	Q2TBE0	894 aa	Known RBP	13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	SLC51A	Q86UW1	340 aa		13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	JARID2	Q92833	1246 aa	Predicted RBP	13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	UTP14A	Q9BVJ6	771 aa	Known RBP	13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	DLEC1	Q9Y238	1755 aa		13.14	□□□□□ -0.31
MRPL55-223	ENST00000459783	DDX58	O95786	925 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	SRGN	P10124	158 aa		13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	RARS	P54136	660 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	SLC10A5	Q5PT55	438 aa		13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	PPP1R42	Q7Z4L9	355 aa		13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	PELP1	Q8IZL8	1130 aa	Known RBP	13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	DNAAF4	Q8WXU2	420 aa		13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	NYX	Q9GZU5	481 aa		13.13	□□□□□ -0.31
MRPL55-223	ENST00000459783	COL4A1	P02462	1669 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	NEURL1B	A8MQ27	555 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	CT47B1	P0C2W7	299 aa	Predicted RBP	13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	HCLS1	P14317	486 aa	Predicted RBP	13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	PDE6B	P35913	854 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	ALDH1L2	Q3SY69	923 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	CRY2	Q49AN0	593 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	FAM89A	Q96GI7	184 aa		13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783	TRMT112	Q9UI30	125 aa	Known RBP	13.12	□□□□□ -0.31
MRPL55-223	ENST00000459783		H0YIN7	160 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	NPHP1	O15259	732 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	GPR162	Q16538	588 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	RTL5	Q5HYW3	569 aa	Predicted RBP	13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	BEND3	Q5T5X7	828 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	CCDC191	Q8NCU4	936 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	SMC4	Q9NTJ3	1288 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	PIM2	Q9P1W9	311 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	BCS1L	Q9Y276	419 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	RNF123	Q5XPI4	1314 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	SH3TC1	Q8TE82	1336 aa		13.11	□□□□□ -0.31
MRPL55-223	ENST00000459783	DDX60	Q8IY21	1712 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	BCAR3	O75815	825 aa		13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	GTF2E1	P29083	439 aa	Predicted RBP	13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	BRPF1	P55201	1214 aa	Predicted RBP	13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	CASP7	P55210	303 aa		13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	CWC25	Q9NXE8	425 aa	Predicted RBP	13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	TNN	Q9UQP3	1299 aa		13.1	□□□□□ -0.31
MRPL55-223	ENST00000459783	CACNA1F	O60840	1977 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	PCCA	P05165	728 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	GCKR	Q14397	625 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	DALRD3	Q5D0E6	543 aa	Known RBP	13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	IFFO2	Q5TF58	517 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	STYK1	Q6J9G0	422 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	LINS1	Q8NG48	757 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	MASTL	Q96GX5	879 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783	LAMB2	P55268	1798 aa		13.09	□□□□□ -0.31
MRPL55-223	ENST00000459783		H7C1W4	665 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	IRS4	O14654	1257 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	NPR1	P16066	1061 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	HOXA10	P31260	410 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	PRELP	P51888	382 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	PRPF40B	Q6NWY9	871 aa	Known RBP	13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	OLFM4	Q6UX06	510 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	TTLL6	Q8N841	843 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	C7orf43	Q8WVR3	580 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	NOB1	Q9ULX3	412 aa	Known RBP	13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	PDZRN3	Q9UPQ7	1066 aa		13.08	□□□□□ -0.32
MRPL55-223	ENST00000459783	SNED1	Q8TER0	1413 aa		13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	SLX4	Q8IY92	1834 aa		13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	NEXN	Q0ZGT2	675 aa		13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	YTHDC1	Q96MU7	727 aa	Known RBP	13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	PTPRC	P08575	1304 aa		13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	CDHR2	Q9BYE9	1310 aa		13.07	□□□□□ -0.32
MRPL55-223	ENST00000459783	SLC4A10	Q6U841	1118 aa		13.06	□□□□□ -0.32
MRPL55-223	ENST00000459783	UBE3B	Q7Z3V4	1068 aa		13.06	□□□□□ -0.32
MRPL55-223	ENST00000459783	NLRP3	Q96P20	1036 aa		13.06	□□□□□ -0.32
MRPL55-223	ENST00000459783	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.06	□□□□□ -0.32
MRPL55-223	ENST00000459783	ARFGEF1	Q9Y6D6	1849 aa		13.06	□□□□□ -0.32
MRPL55-223	ENST00000459783	NFKBIE	O00221	500 aa		13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	C21orf2	O43822	256 aa		13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	SF3B3	Q15393	1217 aa	Known RBP	13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	CNKSR1	Q969H4	720 aa		13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	CRAMP1	Q96RY5	1269 aa		13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	ABCC4	O15439	1325 aa		13.05	□□□□□ -0.32
MRPL55-223	ENST00000459783	GRIN3B	O60391	1043 aa		13.04	□□□□□ -0.32
MRPL55-223	ENST00000459783	ALDH1L1	O75891	902 aa		13.04	□□□□□ -0.32
MRPL55-223	ENST00000459783	EPHA10	Q5JZY3	1008 aa		13.04	□□□□□ -0.32
MRPL55-223	ENST00000459783	SRCIN1	Q9C0H9	1055 aa		13.04	□□□□□ -0.32
MRPL55-223	ENST00000459783	PDE8A	O60658	829 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	TRIM27	P14373	513 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	RASSF7	Q02833	373 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	ARHGAP27	Q6ZUM4	889 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	RPGR	Q92834	1020 aa	Known RBP	13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	CELF1	Q92879	486 aa	Known RBP	13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	KAZALD1	Q96I82	304 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	SEC31B	Q9NQW1	1179 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	CACNA1S	Q13698	1873 aa		13.03	□□□□□ -0.32
MRPL55-223	ENST00000459783	TAF1	P21675	1872 aa		13.02	□□□□□ -0.32
MRPL55-223	ENST00000459783	GRM8	O00222	908 aa		13.02	□□□□□ -0.33

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