RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 CCDC8Q9H0W5 538 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 NOS1P29475 1434 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 ERO1AQ96HE7 468 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 ZNF76P36508 570 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 ATP8B2P98198 1209 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
TRAPPC10-204ENST00000459741 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE15A4D2H0 777 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 ZNF213O14771 459 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE8P0CG41 777 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 DESP17661 470 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 PTGS1P23219 599 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE6Q86UF2 777 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE4Q8IX94 777 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE1Q96RT6 745 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 MEIS3Q99687 375 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 TMOD2Q9NZR1 351 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 GOLGA1Q92805 767 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 CCDC97Q96F63 343 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC10-204ENST00000459741 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 GTF2A1P52655 376 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 SYKP43405 635 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 VPS36Q86VN1 386 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 TSG101Q99816 390 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
TRAPPC10-204ENST00000459741 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 ZNF500O60304 480 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 SEPT11Q9NVA2 429 aaKnown RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 SPAG1Q07617 926 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 GOLGA6L10A0A0M3HER8 536 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 SYT1P21579 422 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 CEP85Q6P2H3 762 aa13.12□□□□□ -0.31
TRAPPC10-204ENST00000459741 IARSP41252 1262 aaKnown RBP13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 NAPBQ9H115 298 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 MNAT1P51948 309 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 VAMP4O75379 141 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 MYZAPP0CAP1 466 aa13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC10-204ENST00000459741 PPM1FP49593 454 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 SMC1AQ14683 1233 aaKnown RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 GOLIM4O00461 696 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 BMP15O95972 392 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 CCDC175P0C221 793 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 BRF1Q92994 677 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 AK2P54819 239 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 HSF2BPO75031 334 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 RAD50Q92878 1312 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 EZRP15311 586 aaKnown RBP13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 USP5P45974 858 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 MYD88Q99836 296 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
TRAPPC10-204ENST00000459741 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 OPA1O60313 960 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms