RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	TRMT112	Q9UI30	125 aa	Known RBP	32.92	■■■□□ 2.86
SEMA3C-205	ENST00000458729	RARS	P54136	660 aa	Known RBP	32.91	■■■□□ 2.86
SEMA3C-205	ENST00000458729	ERFE	Q4G0M1	354 aa		32.91	■■■□□ 2.86
SEMA3C-205	ENST00000458729	BCL2L13	Q9BXK5	485 aa		32.91	■■■□□ 2.86
SEMA3C-205	ENST00000458729		H0YIN7	160 aa		32.9	■■■□□ 2.86
SEMA3C-205	ENST00000458729	BRPF1	P55201	1214 aa	Predicted RBP	32.9	■■■□□ 2.86
SEMA3C-205	ENST00000458729	PTPRC	P08575	1304 aa		32.9	■■■□□ 2.86
SEMA3C-205	ENST00000458729	C2CD5	Q86YS7	1000 aa		32.89	■■■□□ 2.86
SEMA3C-205	ENST00000458729	CHRNA5	P30532	468 aa		32.88	■■■□□ 2.85
SEMA3C-205	ENST00000458729	SH3TC1	Q8TE82	1336 aa		32.88	■■■□□ 2.85
SEMA3C-205	ENST00000458729	KIAA1551	Q9HCM1	1747 aa		32.88	■■■□□ 2.85
SEMA3C-205	ENST00000458729	CWC25	Q9NXE8	425 aa	Predicted RBP	32.88	■■■□□ 2.85
SEMA3C-205	ENST00000458729	KCNA3	P22001	575 aa		32.87	■■■□□ 2.85
SEMA3C-205	ENST00000458729	SLC10A5	Q5PT55	438 aa		32.87	■■■□□ 2.85
SEMA3C-205	ENST00000458729	PIM2	Q9P1W9	311 aa		32.87	■■■□□ 2.85
SEMA3C-205	ENST00000458729	ANKRD31	Q8N7Z5	1873 aa		32.87	■■■□□ 2.85
SEMA3C-205	ENST00000458729	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.87	■■■□□ 2.85
SEMA3C-205	ENST00000458729	RIC1	Q4ADV7	1423 aa		32.86	■■■□□ 2.85
SEMA3C-205	ENST00000458729	KLRG2	A4D1S0	409 aa	Predicted RBP	32.86	■■■□□ 2.85
SEMA3C-205	ENST00000458729	IGKV5-2	P06315	115 aa		32.86	■■■□□ 2.85
SEMA3C-205	ENST00000458729	ABCC12	Q96J65	1359 aa		32.85	■■■□□ 2.85
SEMA3C-205	ENST00000458729		F6X3S4	739 aa		32.85	■■■□□ 2.85
SEMA3C-205	ENST00000458729	LINS1	Q8NG48	757 aa		32.85	■■■□□ 2.85
SEMA3C-205	ENST00000458729	GPR162	Q16538	588 aa		32.84	■■■□□ 2.85
SEMA3C-205	ENST00000458729	NEURL1B	A8MQ27	555 aa		32.83	■■■□□ 2.85
SEMA3C-205	ENST00000458729	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.83	■■■□□ 2.85
SEMA3C-205	ENST00000458729	YTHDC1	Q96MU7	727 aa	Known RBP	32.83	■■■□□ 2.85
SEMA3C-205	ENST00000458729	SRGN	P10124	158 aa		32.82	■■■□□ 2.84
SEMA3C-205	ENST00000458729	PELP1	Q8IZL8	1130 aa	Known RBP	32.82	■■■□□ 2.84
SEMA3C-205	ENST00000458729	FAM89A	Q96GI7	184 aa		32.82	■■■□□ 2.84
SEMA3C-205	ENST00000458729	NLRP3	Q96P20	1036 aa		32.82	■■■□□ 2.84
SEMA3C-205	ENST00000458729	PCCA	P05165	728 aa	Predicted RBP	32.81	■■■□□ 2.84
SEMA3C-205	ENST00000458729	CWF19L2	Q2TBE0	894 aa	Known RBP	32.81	■■■□□ 2.84
SEMA3C-205	ENST00000458729	MASTL	Q96GX5	879 aa		32.81	■■■□□ 2.84
SEMA3C-205	ENST00000458729	KIF16B	Q96L93	1317 aa		32.81	■■■□□ 2.84
SEMA3C-205	ENST00000458729	HSP90B1	P14625	803 aa	Known RBP	32.8	■■■□□ 2.84
SEMA3C-205	ENST00000458729	BEND3	Q5T5X7	828 aa		32.8	■■■□□ 2.84
SEMA3C-205	ENST00000458729	STYK1	Q6J9G0	422 aa		32.8	■■■□□ 2.84
SEMA3C-205	ENST00000458729	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
SEMA3C-205	ENST00000458729	NOB1	Q9ULX3	412 aa	Known RBP	32.8	■■■□□ 2.84
SEMA3C-205	ENST00000458729	NPR1	P16066	1061 aa		32.79	■■■□□ 2.84
SEMA3C-205	ENST00000458729	DALRD3	Q5D0E6	543 aa	Known RBP	32.79	■■■□□ 2.84
SEMA3C-205	ENST00000458729	SLC4A10	Q6U841	1118 aa		32.79	■■■□□ 2.84
SEMA3C-205	ENST00000458729	SYNE4	Q8N205	404 aa		32.79	■■■□□ 2.84
SEMA3C-205	ENST00000458729	CRY2	Q49AN0	593 aa		32.78	■■■□□ 2.84
SEMA3C-205	ENST00000458729	TTLL6	Q8N841	843 aa		32.78	■■■□□ 2.84
SEMA3C-205	ENST00000458729	WWC3	Q9ULE0	1092 aa		32.78	■■■□□ 2.84
SEMA3C-205	ENST00000458729	BCS1L	Q9Y276	419 aa		32.78	■■■□□ 2.84
SEMA3C-205	ENST00000458729	HCLS1	P14317	486 aa	Predicted RBP	32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	GCKR	Q14397	625 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	ARHGAP45	Q92619	1136 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	CNKSR1	Q969H4	720 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	API5	Q9BZZ5	524 aa	Known RBP	32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	DLEC1	Q9Y238	1755 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	IRS4	O14654	1257 aa	Predicted RBP	32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	GRIN3B	O60391	1043 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	YBX3	P16989	372 aa	Known RBP eCLIP	32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	RTL5	Q5HYW3	569 aa	Predicted RBP	32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	SRCIN1	Q9C0H9	1055 aa		32.77	■■■□□ 2.84
SEMA3C-205	ENST00000458729	BRCA1	P38398	1863 aa	Known RBP	32.76	■■■□□ 2.84
SEMA3C-205	ENST00000458729	IPO8	O15397	1037 aa	Known RBP	32.76	■■■□□ 2.83
SEMA3C-205	ENST00000458729	BCAR3	O75815	825 aa		32.76	■■■□□ 2.83
SEMA3C-205	ENST00000458729	ALDH1L1	O75891	902 aa		32.76	■■■□□ 2.83
SEMA3C-205	ENST00000458729	RPGR	Q92834	1020 aa	Known RBP	32.75	■■■□□ 2.83
SEMA3C-205	ENST00000458729	CDHR2	Q9BYE9	1310 aa		32.74	■■■□□ 2.83
SEMA3C-205	ENST00000458729	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.74	■■■□□ 2.83
SEMA3C-205	ENST00000458729	COL11A2	P13942	1736 aa	Predicted RBP	32.74	■■■□□ 2.83
SEMA3C-205	ENST00000458729		H7C1W4	665 aa		32.74	■■■□□ 2.83
SEMA3C-205	ENST00000458729	ALDH1B1	P30837	517 aa		32.73	■■■□□ 2.83
SEMA3C-205	ENST00000458729	HOXA10	P31260	410 aa	Predicted RBP	32.73	■■■□□ 2.83
SEMA3C-205	ENST00000458729	C3orf67	Q6ZVT6	689 aa		32.73	■■■□□ 2.83
SEMA3C-205	ENST00000458729	RBM17	Q96I25	401 aa	Known RBP	32.72	■■■□□ 2.83
SEMA3C-205	ENST00000458729	PDE8A	O60658	829 aa		32.7	■■■□□ 2.82
SEMA3C-205	ENST00000458729	SF3B3	Q15393	1217 aa	Known RBP	32.7	■■■□□ 2.82
SEMA3C-205	ENST00000458729	UBE3B	Q7Z3V4	1068 aa		32.7	■■■□□ 2.82
SEMA3C-205	ENST00000458729	JARID2	Q92833	1246 aa	Predicted RBP	32.7	■■■□□ 2.82
SEMA3C-205	ENST00000458729	FRAT1	Q92837	279 aa	Predicted RBP	32.69	■■■□□ 2.82
SEMA3C-205	ENST00000458729	CRAMP1	Q96RY5	1269 aa		32.69	■■■□□ 2.82
SEMA3C-205	ENST00000458729	DDX60	Q8IY21	1712 aa	Known RBP	32.68	■■■□□ 2.82
SEMA3C-205	ENST00000458729	CCT4	P50991	539 aa	Known RBP	32.67	■■■□□ 2.82
SEMA3C-205	ENST00000458729	PRPF40B	Q6NWY9	871 aa	Known RBP	32.67	■■■□□ 2.82
SEMA3C-205	ENST00000458729	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.67	■■■□□ 2.82
SEMA3C-205	ENST00000458729	GRM8	O00222	908 aa		32.66	■■■□□ 2.82
SEMA3C-205	ENST00000458729	ATF7IP	Q6VMQ6	1270 aa		32.66	■■■□□ 2.82
SEMA3C-205	ENST00000458729	LAMB2	P55268	1798 aa		32.65	■■■□□ 2.82
SEMA3C-205	ENST00000458729	ARFGEF1	Q9Y6D6	1849 aa		32.65	■■■□□ 2.82
SEMA3C-205	ENST00000458729	CASP7	P55210	303 aa		32.65	■■■□□ 2.82
SEMA3C-205	ENST00000458729	ZKSCAN2	Q63HK3	967 aa		32.65	■■■□□ 2.82
SEMA3C-205	ENST00000458729	DDX46	Q7L014	1031 aa	Known RBP	32.65	■■■□□ 2.82
SEMA3C-205	ENST00000458729	PLA2G12B	Q9BX93	195 aa		32.64	■■■□□ 2.82
SEMA3C-205	ENST00000458729	RCAN3	Q9UKA8	241 aa		32.64	■■■□□ 2.82
SEMA3C-205	ENST00000458729	TRIM27	P14373	513 aa		32.62	■■■□□ 2.81
SEMA3C-205	ENST00000458729	CCDC152	Q4G0S7	254 aa		32.62	■■■□□ 2.81
SEMA3C-205	ENST00000458729	SOGA3	Q5TF21	947 aa		32.62	■■■□□ 2.81
SEMA3C-205	ENST00000458729	SLX4	Q8IY92	1834 aa		32.6	■■■□□ 2.81
SEMA3C-205	ENST00000458729	ABCC4	O15439	1325 aa		32.6	■■■□□ 2.81
SEMA3C-205	ENST00000458729	C21orf2	O43822	256 aa		32.6	■■■□□ 2.81
SEMA3C-205	ENST00000458729	CTSW	P56202	376 aa		32.6	■■■□□ 2.81
SEMA3C-205	ENST00000458729	ARHGAP27	Q6ZUM4	889 aa		32.6	■■■□□ 2.81
SEMA3C-205	ENST00000458729	UTY	O14607	1347 aa		32.59	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms