RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NLRP3Q96P20 1036 aa20.68■□□□□ 0.9
CD28-203ENST00000458610 ISCA1Q9BUE6 129 aa20.68■□□□□ 0.9
CD28-203ENST00000458610 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
CD28-203ENST00000458610 NEXNQ0ZGT2 675 aa20.67■□□□□ 0.9
CD28-203ENST00000458610 SH3TC1Q8TE82 1336 aa20.67■□□□□ 0.9
CD28-203ENST00000458610 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
CD28-203ENST00000458610 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
CD28-203ENST00000458610 RPGRQ92834 1020 aaKnown RBP20.66■□□□□ 0.9
CD28-203ENST00000458610 METTL22Q9BUU2 404 aaPredicted RBP20.66■□□□□ 0.9
CD28-203ENST00000458610 RIC1Q4ADV7 1423 aa20.65■□□□□ 0.9
CD28-203ENST00000458610 ATP5J2-PTCD1G3V325 749 aa20.65■□□□□ 0.9
CD28-203ENST00000458610 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
CD28-203ENST00000458610 ZNF428Q96B54 188 aa20.65■□□□□ 0.9
CD28-203ENST00000458610 MAP3K2Q9Y2U5 619 aa20.65■□□□□ 0.9
CD28-203ENST00000458610 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.89
CD28-203ENST00000458610 FLIIQ13045 1269 aa20.64■□□□□ 0.89
CD28-203ENST00000458610 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
CD28-203ENST00000458610 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.89
CD28-203ENST00000458610 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
CD28-203ENST00000458610 MYD88Q99836 296 aa20.64■□□□□ 0.89
CD28-203ENST00000458610 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
CD28-203ENST00000458610 HOXA10P31260 410 aaPredicted RBP20.62■□□□□ 0.89
CD28-203ENST00000458610 PRPF40BQ6NWY9 871 aaKnown RBP20.62■□□□□ 0.89
CD28-203ENST00000458610 CWC25Q9NXE8 425 aaPredicted RBP20.62■□□□□ 0.89
CD28-203ENST00000458610 ABCC12Q96J65 1359 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 C21orf2O43822 256 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 CT47B1P0C2W7 299 aaPredicted RBP20.61■□□□□ 0.89
CD28-203ENST00000458610 G2E3Q7L622 706 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
CD28-203ENST00000458610 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
CD28-203ENST00000458610 CDCA7LQ96GN5 454 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
CD28-203ENST00000458610 CHD4Q14839 1912 aa20.61■□□□□ 0.89
CD28-203ENST00000458610 ANKRD31Q8N7Z5 1873 aa20.6■□□□□ 0.89
CD28-203ENST00000458610 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
CD28-203ENST00000458610 FAM89AQ96GI7 184 aa20.6■□□□□ 0.89
CD28-203ENST00000458610 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
CD28-203ENST00000458610 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
CD28-203ENST00000458610 CC2D2BQ6DHV5 1058 aa20.59■□□□□ 0.89
CD28-203ENST00000458610 DNAAF4Q8WXU2 420 aa20.59■□□□□ 0.89
CD28-203ENST00000458610 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
CD28-203ENST00000458610 HCLS1P14317 486 aaPredicted RBP20.58■□□□□ 0.89
CD28-203ENST00000458610 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
CD28-203ENST00000458610 DLEC1Q9Y238 1755 aa20.58■□□□□ 0.89
CD28-203ENST00000458610 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
CD28-203ENST00000458610 IRS4O14654 1257 aaPredicted RBP20.57■□□□□ 0.88
CD28-203ENST00000458610 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
CD28-203ENST00000458610 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
CD28-203ENST00000458610 RTKN2Q8IZC4 609 aa20.57■□□□□ 0.88
CD28-203ENST00000458610 ADCY9O60503 1353 aa20.57■□□□□ 0.88
CD28-203ENST00000458610 ANKRD36CQ5JPF3 1778 aa20.57■□□□□ 0.88
CD28-203ENST00000458610 BBOX1O75936 387 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 LMNB1P20700 586 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 C9orf131Q5VYM1 1079 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 SYNE4Q8N205 404 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 LINS1Q8NG48 757 aa20.56■□□□□ 0.88
CD28-203ENST00000458610 SF3B3Q15393 1217 aaKnown RBP20.55■□□□□ 0.88
CD28-203ENST00000458610 ZNF784Q8NCA9 323 aaPredicted RBP20.55■□□□□ 0.88
CD28-203ENST00000458610 C7orf43Q8WVR3 580 aa20.55■□□□□ 0.88
CD28-203ENST00000458610 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
CD28-203ENST00000458610 NEURL1BA8MQ27 555 aa20.54■□□□□ 0.88
CD28-203ENST00000458610 IGKV5-2P06315 115 aa20.54■□□□□ 0.88
CD28-203ENST00000458610 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
CD28-203ENST00000458610 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
CD28-203ENST00000458610 RNF181Q9P0P0 153 aa20.54■□□□□ 0.88
CD28-203ENST00000458610 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
CD28-203ENST00000458610 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
CD28-203ENST00000458610 TMC4Q7Z404 712 aa20.53■□□□□ 0.88
CD28-203ENST00000458610 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
CD28-203ENST00000458610 ARFGEF2Q9Y6D5 1785 aa20.53■□□□□ 0.88
CD28-203ENST00000458610 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
CD28-203ENST00000458610 PPEF1O14829 653 aaPredicted RBP20.52■□□□□ 0.88
CD28-203ENST00000458610 PDE8AO60658 829 aa20.52■□□□□ 0.88
CD28-203ENST00000458610 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
CD28-203ENST00000458610 COL11A2P13942 1736 aaPredicted RBP20.52■□□□□ 0.88
CD28-203ENST00000458610 PTPRCP08575 1304 aa20.52■□□□□ 0.87
CD28-203ENST00000458610 NFKBIEO00221 500 aa20.51■□□□□ 0.87
CD28-203ENST00000458610 GRAPQ13588 217 aa20.51■□□□□ 0.87
CD28-203ENST00000458610 GCKRQ14397 625 aa20.51■□□□□ 0.87
CD28-203ENST00000458610 CWF19L2Q2TBE0 894 aaKnown RBP20.51■□□□□ 0.87
CD28-203ENST00000458610 GRAPLQ8TC17 118 aaPredicted RBP20.51■□□□□ 0.87
CD28-203ENST00000458610 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
CD28-203ENST00000458610 H7C1W4 665 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
CD28-203ENST00000458610 RASSF7Q02833 373 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 CCDC152Q4G0S7 254 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 ATP6V0A2Q9Y487 856 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 ABCC4O15439 1325 aa20.5■□□□□ 0.87
CD28-203ENST00000458610 SLX4Q8IY92 1834 aa20.49■□□□□ 0.87
CD28-203ENST00000458610 F6X3S4 739 aa20.49■□□□□ 0.87
CD28-203ENST00000458610 ALDH1L1O75891 902 aa20.49■□□□□ 0.87
CD28-203ENST00000458610 BEND3Q5T5X7 828 aa20.49■□□□□ 0.87
CD28-203ENST00000458610 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
CD28-203ENST00000458610 TNRC6CQ9HCJ0 1690 aaKnown RBP20.48■□□□□ 0.87
CD28-203ENST00000458610 SLC4A10Q6U841 1118 aa20.48■□□□□ 0.87
CD28-203ENST00000458610 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
CD28-203ENST00000458610 PSMD1Q99460 953 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms