RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GCP02774 474 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
SCFD1-203ENST00000458591 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 STK3Q13188 491 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 PDIA6Q15084 440 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
SCFD1-203ENST00000458591 RUFY2Q8WXA3 655 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 TSC1Q92574 1164 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 NFAT5O94916 1531 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 GRM8O00222 908 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 SLC27A2O14975 620 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 PHF14O94880 888 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 EVI5LQ96CN4 794 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
SCFD1-203ENST00000458591 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
SCFD1-203ENST00000458591 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCFD1-203ENST00000458591 CAMK4Q16566 473 aa16.92■□□□□ 0.3
SCFD1-203ENST00000458591 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
SCFD1-203ENST00000458591 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 FUCA2Q9BTY2 467 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 TTC6Q86TZ1 520 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
SCFD1-203ENST00000458591 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
SCFD1-203ENST00000458591 LARP1BQ659C4 914 aaKnown RBP16.9■□□□□ 0.3
SCFD1-203ENST00000458591 RIC3Q7Z5B4 369 aa16.9■□□□□ 0.3
SCFD1-203ENST00000458591 LINS1Q8NG48 757 aa16.9■□□□□ 0.3
SCFD1-203ENST00000458591 KCNB2Q92953 911 aa16.9■□□□□ 0.3
SCFD1-203ENST00000458591 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
SCFD1-203ENST00000458591 FAM177BA6PVY3 158 aa16.89■□□□□ 0.3
SCFD1-203ENST00000458591 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.3
SCFD1-203ENST00000458591 LIG1P18858 919 aa16.89■□□□□ 0.3
SCFD1-203ENST00000458591 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.3
SCFD1-203ENST00000458591 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.3
SCFD1-203ENST00000458591 KCNH5Q8NCM2 988 aa16.89■□□□□ 0.3
SCFD1-203ENST00000458591 DNTTIP2Q5QJE6 756 aaKnown RBP16.89■□□□□ 0.29
SCFD1-203ENST00000458591 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
SCFD1-203ENST00000458591 KDM4AO75164 1064 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 SPC24Q8NBT2 197 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 MYD88Q99836 296 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
SCFD1-203ENST00000458591 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 ERC1Q8IUD2 1116 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 PKNOX2Q96KN3 472 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
SCFD1-203ENST00000458591 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
SCFD1-203ENST00000458591 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
SCFD1-203ENST00000458591 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
SCFD1-203ENST00000458591 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
SCFD1-203ENST00000458591 ZMYND15Q9H091 742 aa16.87■□□□□ 0.29
SCFD1-203ENST00000458591 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCFD1-203ENST00000458591 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
SCFD1-203ENST00000458591 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
SCFD1-203ENST00000458591 SH2B1Q9NRF2 756 aaPredicted RBP16.87■□□□□ 0.29
SCFD1-203ENST00000458591 COL15A1P39059 1388 aa16.87■□□□□ 0.29
SCFD1-203ENST00000458591 JAK2O60674 1132 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 NOLC1Q14978 699 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCFD1-203ENST00000458591 CKAP2LQ8IYA6 745 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 NPHP4O75161 1426 aaPredicted RBP16.86■□□□□ 0.29
SCFD1-203ENST00000458591 NEURL1BA8MQ27 555 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 BLOC1S2Q6QNY1 142 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
SCFD1-203ENST00000458591 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
SCFD1-203ENST00000458591 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
SCFD1-203ENST00000458591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
SCFD1-203ENST00000458591 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
SCFD1-203ENST00000458591 PTCD1O75127 700 aaKnown RBP16.85■□□□□ 0.29
SCFD1-203ENST00000458591 KCNF1Q9H3M0 494 aa16.85■□□□□ 0.29
SCFD1-203ENST00000458591 RPS6KB1P23443 525 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 FOSBP53539 338 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 TFCP2Q12800 502 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 GCKRQ14397 625 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
SCFD1-203ENST00000458591 PYCARDQ9ULZ3 195 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 UTYO14607 1347 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
SCFD1-203ENST00000458591 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 PIBF1Q8WXW3 757 aa16.84■□□□□ 0.29
SCFD1-203ENST00000458591 TAF5LO75529 589 aa16.83■□□□□ 0.28
SCFD1-203ENST00000458591 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
SCFD1-203ENST00000458591 LUZP1Q86V48 1076 aa16.83■□□□□ 0.28
SCFD1-203ENST00000458591 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
SCFD1-203ENST00000458591 DNAJC2Q99543 621 aaKnown RBP16.83■□□□□ 0.28
SCFD1-203ENST00000458591 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms