RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 CRTC2Q53ET0 693 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF187Q5TA31 235 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 SOGA3Q5TF21 947 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 METTL16Q86W50 562 aaKnown RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 GLYCTKQ8IVS8 523 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 SMC5Q8IY18 1101 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 PRG4Q92954 1404 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 IRF7Q92985 503 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 INSM2Q96T92 566 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 ZNF395Q9H8N7 513 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 CAPN10Q9HC96 672 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 CYLDQ9NQC7 956 aa6.46□□□□□ -1.38
SPARCL1-204ENST00000458304 FIGNL2A6NMB9 653 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 ICMTO60725 284 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 EIF3JO75822 258 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 SCNN1AP37088 669 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 ERVK-9P63128 1117 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 PTK7Q13308 1070 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 FAM50AQ14320 339 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 SWI5Q1ZZU3 235 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 LDLRAD1Q5T700 205 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 LARP1Q6PKG0 1096 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 PMFBP1Q8TBY8 1022 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 CHPF2Q9P2E5 772 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 ITSN2Q9NZM3 1697 aa6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 EPRSP07814 1512 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-204ENST00000458304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 USP17L5A8MUK1 530 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 PIK3CDO00329 1044 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 MAFGO15525 162 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 CENPBP07199 599 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 PTSQ03393 145 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 RBL2Q08999 1139 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 RALBP1Q15311 655 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 ZNF746Q6NUN9 644 aaPredicted RBP6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF135Q8IUD6 432 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 GMLQ99445 158 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 DISP1Q96F81 1524 aa6.44□□□□□ -1.38
SPARCL1-204ENST00000458304 SHROOM2Q13796 1616 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 RRBP1Q9P2E9 1410 aaKnown RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 SLC35F4A4IF30 521 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 RASA1P20936 1047 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 HSD3B2P26439 372 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 ITGAEP38570 1179 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 SCTRP47872 440 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 INSM1Q01101 510 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 ZNF211Q13398 564 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 APBB1IPQ7Z5R6 666 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 RGL4Q8IZJ4 473 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 TMEM87AQ8NBN3 555 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 UBA5Q9GZZ9 404 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 POLMQ9NP87 494 aaPredicted RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 METTL5Q9NRN9 209 aaKnown RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 MKRN1Q9UHC7 482 aaKnown RBP6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 KIF14Q15058 1648 aa6.43□□□□□ -1.38
SPARCL1-204ENST00000458304 C21orf2O43822 256 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 SKIP12755 728 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 JAZF1Q86VZ6 243 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 ANKMY2Q8IV38 441 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF34Q969K3 372 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 CCDC85AQ96PX6 553 aaPredicted RBP6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 MYOM3Q5VTT5 1437 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 UACAQ9BZF9 1416 aa6.42□□□□□ -1.38
SPARCL1-204ENST00000458304 SENP3-EIF4A1A0A087X0R7 540 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 A0A0U1RQG5 324 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 ATP5J2-PTCD1G3V325 749 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 DNAJA1P31689 397 aaKnown RBP6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 FANCCQ00597 558 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 PHTF2Q8N3S3 785 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 TRIM52Q96A61 297 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 OSBPL2Q9H1P3 480 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 OSBPL3Q9H4L5 887 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 ANO2Q9NQ90 1003 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 CLSPNQ9HAW4 1339 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 TROQ12816 1431 aaPredicted RBP6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 NCOA2Q15596 1464 aa6.41□□□□□ -1.38
SPARCL1-204ENST00000458304 CLASP1Q7Z460 1538 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 U2SURPO15042 1029 aaKnown RBP6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 CREB3O43889 395 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 P4HBP07237 508 aaKnown RBP6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 TAS1R3Q7RTX0 852 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 CCAR1Q8IX12 1150 aaKnown RBP6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 CCDC155Q8N6L0 562 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 NANOS1Q8WY41 292 aaKnown RBP6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 PMM1Q92871 262 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 ACBD3Q9H3P7 528 aa6.4□□□□□ -1.38
SPARCL1-204ENST00000458304 A0A1W2PRU2 124 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 GPC1P35052 558 aa6.39□□□□□ -1.39
SPARCL1-204ENST00000458304 GPR161Q8N6U8 529 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms