RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
CSRP1-203ENST00000458271 TCIRG1Q13488 830 aa16.07■□□□□ 0.16
CSRP1-203ENST00000458271 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
CSRP1-203ENST00000458271 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
CSRP1-203ENST00000458271 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
CSRP1-203ENST00000458271 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
CSRP1-203ENST00000458271 GPBP1L1Q9HC44 474 aaPredicted RBP16.07■□□□□ 0.16
CSRP1-203ENST00000458271 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
CSRP1-203ENST00000458271 LAMB2P55268 1798 aa16.06■□□□□ 0.16
CSRP1-203ENST00000458271 NFKBIEO00221 500 aa16.06■□□□□ 0.16
CSRP1-203ENST00000458271 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
CSRP1-203ENST00000458271 NLRP10Q86W26 655 aa16.06■□□□□ 0.16
CSRP1-203ENST00000458271 PHAXQ9H814 394 aaKnown RBP16.06■□□□□ 0.16
CSRP1-203ENST00000458271 PRELPP51888 382 aa16.05■□□□□ 0.16
CSRP1-203ENST00000458271 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
CSRP1-203ENST00000458271 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
CSRP1-203ENST00000458271 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
CSRP1-203ENST00000458271 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
CSRP1-203ENST00000458271 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
CSRP1-203ENST00000458271 LMNB1P20700 586 aa16.04■□□□□ 0.16
CSRP1-203ENST00000458271 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
CSRP1-203ENST00000458271 C3orf67Q6ZVT6 689 aa16.04■□□□□ 0.16
CSRP1-203ENST00000458271 RPGRQ92834 1020 aaKnown RBP16.04■□□□□ 0.16
CSRP1-203ENST00000458271 ATP5J2-PTCD1G3V325 749 aa16.03■□□□□ 0.16
CSRP1-203ENST00000458271 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
CSRP1-203ENST00000458271 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
CSRP1-203ENST00000458271 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
CSRP1-203ENST00000458271 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
CSRP1-203ENST00000458271 TRMT112Q9UI30 125 aaKnown RBP16.03■□□□□ 0.16
CSRP1-203ENST00000458271 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
CSRP1-203ENST00000458271 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 OLFM4Q6UX06 510 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 TAOK3Q9H2K8 898 aa16.02■□□□□ 0.16
CSRP1-203ENST00000458271 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.15
CSRP1-203ENST00000458271 HCLS1P14317 486 aaPredicted RBP16.01■□□□□ 0.15
CSRP1-203ENST00000458271 HOXA10P31260 410 aaPredicted RBP16.01■□□□□ 0.15
CSRP1-203ENST00000458271 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
CSRP1-203ENST00000458271 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
CSRP1-203ENST00000458271 NLRP3Q96P20 1036 aa16.01■□□□□ 0.15
CSRP1-203ENST00000458271 ZNF521Q96K83 1311 aa16.01■□□□□ 0.15
CSRP1-203ENST00000458271 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
CSRP1-203ENST00000458271 CCER2I3L3R5 266 aa16■□□□□ 0.15
CSRP1-203ENST00000458271 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
CSRP1-203ENST00000458271 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
CSRP1-203ENST00000458271 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
CSRP1-203ENST00000458271 MYD88Q99836 296 aa16■□□□□ 0.15
CSRP1-203ENST00000458271 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
CSRP1-203ENST00000458271 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
CSRP1-203ENST00000458271 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
CSRP1-203ENST00000458271 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
CSRP1-203ENST00000458271 CACNA1FO60840 1977 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 C1QTNF8P60827 252 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
CSRP1-203ENST00000458271 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
CSRP1-203ENST00000458271 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 ABCC4O15439 1325 aa15.98■□□□□ 0.15
CSRP1-203ENST00000458271 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
CSRP1-203ENST00000458271 VAMP4O75379 141 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 G2E3Q7L622 706 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 RTKN2Q8IZC4 609 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
CSRP1-203ENST00000458271 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 TAF1P21675 1872 aa15.97■□□□□ 0.15
CSRP1-203ENST00000458271 KIF3CO14782 793 aa15.96■□□□□ 0.15
CSRP1-203ENST00000458271 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSRP1-203ENST00000458271 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
CSRP1-203ENST00000458271 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
CSRP1-203ENST00000458271 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
CSRP1-203ENST00000458271 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
CSRP1-203ENST00000458271 FLIIQ13045 1269 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
CSRP1-203ENST00000458271 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
CSRP1-203ENST00000458271 COL4A1P02462 1669 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 GLTPD2A6NH11 291 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
CSRP1-203ENST00000458271 CC2D2BQ6DHV5 1058 aa15.94■□□□□ 0.14
CSRP1-203ENST00000458271 DDX46Q7L014 1031 aaKnown RBP15.94■□□□□ 0.14
CSRP1-203ENST00000458271 CEP350Q5VT06 3117 aa15.93■□□□□ 0.14
CSRP1-203ENST00000458271 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
CSRP1-203ENST00000458271 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
CSRP1-203ENST00000458271 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
CSRP1-203ENST00000458271 PSMD1Q99460 953 aa15.93■□□□□ 0.14
CSRP1-203ENST00000458271 ATP6V0A2Q9Y487 856 aa15.93■□□□□ 0.14
CSRP1-203ENST00000458271 WDR90Q96KV7 1748 aa15.92■□□□□ 0.14
CSRP1-203ENST00000458271 COL4A5P29400 1685 aa15.92■□□□□ 0.14
CSRP1-203ENST00000458271 E9PSI1 815 aa15.92■□□□□ 0.14
CSRP1-203ENST00000458271 GRAPQ13588 217 aa15.92■□□□□ 0.14
CSRP1-203ENST00000458271 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms