RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 MCM10Q7L590 875 aa19.15■□□□□ 0.66
UPF3AP2-201ENST00000457924 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
UPF3AP2-201ENST00000457924 ZNF541Q9H0D2 1346 aa19.15■□□□□ 0.66
UPF3AP2-201ENST00000457924 C19orf67A6NJJ6 358 aa19.14■□□□□ 0.65
UPF3AP2-201ENST00000457924 FAM177BA6PVY3 158 aa19.14■□□□□ 0.65
UPF3AP2-201ENST00000457924 FOXN1O15353 648 aa19.14■□□□□ 0.65
UPF3AP2-201ENST00000457924 ALDH1B1P30837 517 aa19.14■□□□□ 0.65
UPF3AP2-201ENST00000457924 AIDAQ96BJ3 306 aa19.14■□□□□ 0.65
UPF3AP2-201ENST00000457924 NBPF26B4DH59 902 aa19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 ITGBL1O95965 494 aaPredicted RBP19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 GTF2E1P29083 439 aaPredicted RBP19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 NBPF10Q6P3W6 841 aaKnown RBP19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 NBPF15Q8N660 670 aa19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
UPF3AP2-201ENST00000457924 EPHX2P34913 555 aa19.12■□□□□ 0.65
UPF3AP2-201ENST00000457924 IARSP41252 1262 aaKnown RBP19.12■□□□□ 0.65
UPF3AP2-201ENST00000457924 VEGFBP49765 207 aa19.12■□□□□ 0.65
UPF3AP2-201ENST00000457924 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
UPF3AP2-201ENST00000457924 PNMA8AQ86V59 439 aaPredicted RBP19.12■□□□□ 0.65
UPF3AP2-201ENST00000457924 CTCFP49711 727 aaPredicted RBP19.11■□□□□ 0.65
UPF3AP2-201ENST00000457924 SYNE4Q8N205 404 aa19.11■□□□□ 0.65
UPF3AP2-201ENST00000457924 ADAMTSL1Q8N6G6 1762 aa19.11■□□□□ 0.65
UPF3AP2-201ENST00000457924 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 FZD9O00144 591 aa19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 HTATSF1O43719 755 aaKnown RBP19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 DCTN1Q14203 1278 aa19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 GPC2Q8N158 579 aa19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 JDP2Q8WYK2 163 aa19.1■□□□□ 0.65
UPF3AP2-201ENST00000457924 HLFQ16534 295 aa19.09■□□□□ 0.65
UPF3AP2-201ENST00000457924 CNTROBQ8N137 903 aa19.09■□□□□ 0.65
UPF3AP2-201ENST00000457924 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
UPF3AP2-201ENST00000457924 TAF7Q15545 349 aaPredicted RBP19.08■□□□□ 0.64
UPF3AP2-201ENST00000457924 PSMD1Q99460 953 aa19.08■□□□□ 0.64
UPF3AP2-201ENST00000457924 NYXQ9GZU5 481 aa19.08■□□□□ 0.64
UPF3AP2-201ENST00000457924 DEFB115Q30KQ5 88 aa19.07■□□□□ 0.64
UPF3AP2-201ENST00000457924 MAP1SQ66K74 1059 aaPredicted RBP19.07■□□□□ 0.64
UPF3AP2-201ENST00000457924 WBP1LQ9NX94 342 aa19.07■□□□□ 0.64
UPF3AP2-201ENST00000457924 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 HAX1O00165 279 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 EIF6P56537 245 aaKnown RBP19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 CC2D2BQ6DHV5 1058 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 NUP98P52948 1817 aa19.06■□□□□ 0.64
UPF3AP2-201ENST00000457924 ERVV-1B6SEH8 477 aa19.05■□□□□ 0.64
UPF3AP2-201ENST00000457924 PPP2R1AP30153 589 aa19.05■□□□□ 0.64
UPF3AP2-201ENST00000457924 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
UPF3AP2-201ENST00000457924 MIS18AQ9NYP9 233 aa19.05■□□□□ 0.64
UPF3AP2-201ENST00000457924 ABT1Q9ULW3 272 aaKnown RBP19.05■□□□□ 0.64
UPF3AP2-201ENST00000457924 LMOD1P29536 600 aaPredicted RBP19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 LBX1P52954 281 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 GRIPAP1Q4V328 841 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 SNED1Q8TER0 1413 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 PNISRQ8TF01 805 aaKnown RBP19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 GJA3Q9Y6H8 435 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
UPF3AP2-201ENST00000457924 WDR33Q9C0J8 1336 aaKnown RBP19.03■□□□□ 0.64
UPF3AP2-201ENST00000457924 NEFMP07197 916 aa19.03■□□□□ 0.64
UPF3AP2-201ENST00000457924 MAP2K1Q02750 393 aaPredicted RBP19.03■□□□□ 0.64
UPF3AP2-201ENST00000457924 MAP3K15Q6ZN16 1313 aa19.02■□□□□ 0.64
UPF3AP2-201ENST00000457924 FAM212AQ96EL1 285 aa19.02■□□□□ 0.64
UPF3AP2-201ENST00000457924 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.64
UPF3AP2-201ENST00000457924 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 LARGE2Q8N3Y3 721 aa19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 TSPYL2Q9H2G4 693 aaPredicted RBP19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 RRP7AQ9Y3A4 280 aaKnown RBP19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 DLG5Q8TDM6 1919 aa19.01■□□□□ 0.63
UPF3AP2-201ENST00000457924 HSPA8P11142 646 aaKnown RBP19■□□□□ 0.63
UPF3AP2-201ENST00000457924 EVX2Q03828 476 aa19■□□□□ 0.63
UPF3AP2-201ENST00000457924 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
UPF3AP2-201ENST00000457924 IBTKQ9P2D0 1353 aaPredicted RBP19■□□□□ 0.63
UPF3AP2-201ENST00000457924 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
UPF3AP2-201ENST00000457924 COL4A5P29400 1685 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 MYL6BP14649 208 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 GPTP24298 496 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 TTLL7Q6ZT98 887 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 ZBTB3Q9H5J0 574 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 LTBP1Q14766 1721 aa18.99■□□□□ 0.63
UPF3AP2-201ENST00000457924 PPEF1O14829 653 aaPredicted RBP18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 EPS15P42566 896 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 SCNN1DP51172 638 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 DCAF8Q5TAQ9 597 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 SUSD4Q5VX71 490 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 PAXIP1Q6ZW49 1069 aaPredicted RBP18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 NIM1KQ8IY84 436 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 TMX4Q9H1E5 349 aaPredicted RBP18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 UBN2Q6ZU65 1347 aa18.98■□□□□ 0.63
UPF3AP2-201ENST00000457924 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 ECE1P42892 770 aa18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 GSE1Q14687 1217 aa18.97■□□□□ 0.63
UPF3AP2-201ENST00000457924 USP50Q70EL3 339 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms