RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 PSMD1Q99460 953 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 ZEB1P37275 1124 aaPredicted RBP17.48■□□□□ 0.39
SMARCA2-216ENST00000457226 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
SMARCA2-216ENST00000457226 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
SMARCA2-216ENST00000457226 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
SMARCA2-216ENST00000457226 HDGFL1Q5TGJ6 251 aa17.47■□□□□ 0.39
SMARCA2-216ENST00000457226 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
SMARCA2-216ENST00000457226 DBF4Q9UBU7 674 aaPredicted RBP17.47■□□□□ 0.39
SMARCA2-216ENST00000457226 NUP98P52948 1817 aa17.47■□□□□ 0.39
SMARCA2-216ENST00000457226 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 PROSER3Q2NL68 480 aa17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 L3MBTL3Q96JM7 780 aaPredicted RBP17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-216ENST00000457226 POTECB2RU33 542 aa17.45■□□□□ 0.38
SMARCA2-216ENST00000457226 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
SMARCA2-216ENST00000457226 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
SMARCA2-216ENST00000457226 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
SMARCA2-216ENST00000457226 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
SMARCA2-216ENST00000457226 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 ANXA1P04083 346 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 GNAI1P63096 354 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 TCIRG1Q13488 830 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 CHADLQ6NUI6 762 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 CACNA1SQ13698 1873 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
SMARCA2-216ENST00000457226 PLBD2Q8NHP8 589 aa17.43■□□□□ 0.38
SMARCA2-216ENST00000457226 VPS33BQ9H267 617 aa17.43■□□□□ 0.38
SMARCA2-216ENST00000457226 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
SMARCA2-216ENST00000457226 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
SMARCA2-216ENST00000457226 FZD9O00144 591 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 BBOX1O75936 387 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 GPC2Q8N158 579 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
SMARCA2-216ENST00000457226 SNED1Q8TER0 1413 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 APAF1O14727 1248 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 KRT24Q2M2I5 525 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 PNMA8AQ86V59 439 aaPredicted RBP17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
SMARCA2-216ENST00000457226 ZNF853P0CG23 659 aa17.4■□□□□ 0.38
SMARCA2-216ENST00000457226 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
SMARCA2-216ENST00000457226 TMC4Q7Z404 712 aa17.4■□□□□ 0.38
SMARCA2-216ENST00000457226 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
SMARCA2-216ENST00000457226 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-216ENST00000457226 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
SMARCA2-216ENST00000457226 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
SMARCA2-216ENST00000457226 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
SMARCA2-216ENST00000457226 SP8Q8IXZ3 490 aa17.38■□□□□ 0.37
SMARCA2-216ENST00000457226 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
SMARCA2-216ENST00000457226 SCN4AP35499 1836 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 EPHX2P34913 555 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 HTRA3P83110 453 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 ABCC4O15439 1325 aa17.37■□□□□ 0.37
SMARCA2-216ENST00000457226 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-216ENST00000457226 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
SMARCA2-216ENST00000457226 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-216ENST00000457226 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 GRAPQ13588 217 aa17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
SMARCA2-216ENST00000457226 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 MPNDQ8N594 471 aa17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
SMARCA2-216ENST00000457226 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
SMARCA2-216ENST00000457226 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
SMARCA2-216ENST00000457226 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
SMARCA2-216ENST00000457226 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
SMARCA2-216ENST00000457226 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
SMARCA2-216ENST00000457226 FAM89AQ96GI7 184 aa17.32■□□□□ 0.36
SMARCA2-216ENST00000457226 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms