RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 GTF2E1P29083 439 aaPredicted RBP26.08■■□□□ 1.77
FAM3A-217ENST00000457212 ST5P78524 1137 aa26.08■■□□□ 1.77
FAM3A-217ENST00000457212 BEND3Q5T5X7 828 aa26.08■■□□□ 1.77
FAM3A-217ENST00000457212 ZKSCAN2Q63HK3 967 aa26.08■■□□□ 1.77
FAM3A-217ENST00000457212 CD2APQ9Y5K6 639 aa26.08■■□□□ 1.77
FAM3A-217ENST00000457212 SLC4A10Q6U841 1118 aa26.07■■□□□ 1.76
FAM3A-217ENST00000457212 ATF7IPQ6VMQ6 1270 aa26.07■■□□□ 1.76
FAM3A-217ENST00000457212 TRMT112Q9UI30 125 aaKnown RBP26.07■■□□□ 1.76
FAM3A-217ENST00000457212 KIF13BQ9NQT8 1826 aa26.07■■□□□ 1.76
FAM3A-217ENST00000457212 ALDH1L1O75891 902 aa26.06■■□□□ 1.76
FAM3A-217ENST00000457212 CWF19L2Q2TBE0 894 aaKnown RBP26.05■■□□□ 1.76
FAM3A-217ENST00000457212 BRIP1Q9BX63 1249 aa26.05■■□□□ 1.76
FAM3A-217ENST00000457212 SRCIN1Q9C0H9 1055 aa26.05■■□□□ 1.76
FAM3A-217ENST00000457212 SH3TC1Q8TE82 1336 aa26.05■■□□□ 1.76
FAM3A-217ENST00000457212 TRIM27P14373 513 aa26.04■■□□□ 1.76
FAM3A-217ENST00000457212 GCKRQ14397 625 aa26.04■■□□□ 1.76
FAM3A-217ENST00000457212 ZBTB38Q8NAP3 1195 aaPredicted RBP26.04■■□□□ 1.76
FAM3A-217ENST00000457212 PCCAP05165 728 aaPredicted RBP26.03■■□□□ 1.76
FAM3A-217ENST00000457212 CCT4P50991 539 aaKnown RBP26.03■■□□□ 1.76
FAM3A-217ENST00000457212 ERFEQ4G0M1 354 aa26.03■■□□□ 1.76
FAM3A-217ENST00000457212 SLC10A5Q5PT55 438 aa26.03■■□□□ 1.76
FAM3A-217ENST00000457212 NUTM1Q86Y26 1132 aa26.03■■□□□ 1.76
FAM3A-217ENST00000457212 FHDC1Q9C0D6 1143 aaPredicted RBP26.03■■□□□ 1.76
FAM3A-217ENST00000457212 RIC1Q4ADV7 1423 aa26.03■■□□□ 1.76
FAM3A-217ENST00000457212 N4BP2Q86UW6 1770 aaPredicted RBP26.02■■□□□ 1.76
FAM3A-217ENST00000457212 KLHL34Q8N239 644 aa26.02■■□□□ 1.76
FAM3A-217ENST00000457212 PDZRN3Q9UPQ7 1066 aa26.02■■□□□ 1.76
FAM3A-217ENST00000457212 ABCC4O15439 1325 aa26.02■■□□□ 1.76
FAM3A-217ENST00000457212 HSP90B1P14625 803 aaKnown RBP26.01■■□□□ 1.75
FAM3A-217ENST00000457212 PDE6BP35913 854 aa26.01■■□□□ 1.75
FAM3A-217ENST00000457212 TGFB2P61812 414 aa26.01■■□□□ 1.75
FAM3A-217ENST00000457212 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.01■■□□□ 1.75
FAM3A-217ENST00000457212 ABCC12Q96J65 1359 aa26■■□□□ 1.75
FAM3A-217ENST00000457212 MS4A1P11836 297 aa26■■□□□ 1.75
FAM3A-217ENST00000457212 CCDC24Q8N4L8 307 aa26■■□□□ 1.75
FAM3A-217ENST00000457212 FAM89AQ96GI7 184 aa26■■□□□ 1.75
FAM3A-217ENST00000457212 ANKRD31Q8N7Z5 1873 aa26■■□□□ 1.75
FAM3A-217ENST00000457212 H7C1W4 665 aa25.99■■□□□ 1.75
FAM3A-217ENST00000457212 INTS3Q68E01 1043 aaKnown RBP25.99■■□□□ 1.75
FAM3A-217ENST00000457212 SYT17Q9BSW7 474 aa25.99■■□□□ 1.75
FAM3A-217ENST00000457212 CDHR2Q9BYE9 1310 aa25.98■■□□□ 1.75
FAM3A-217ENST00000457212 KLRG2A4D1S0 409 aaPredicted RBP25.97■■□□□ 1.75
FAM3A-217ENST00000457212 FTSJ3Q8IY81 847 aaKnown RBP25.97■■□□□ 1.75
FAM3A-217ENST00000457212 DZIP1LQ8IYY4 767 aaKnown RBP25.97■■□□□ 1.75
FAM3A-217ENST00000457212 C9orf78Q9NZ63 289 aaPredicted RBP25.97■■□□□ 1.75
FAM3A-217ENST00000457212 GRM8O00222 908 aa25.96■■□□□ 1.75
FAM3A-217ENST00000457212 IRS4O14654 1257 aaPredicted RBP25.96■■□□□ 1.75
FAM3A-217ENST00000457212 SYNE4Q8N205 404 aa25.96■■□□□ 1.75
FAM3A-217ENST00000457212 CLUAP1Q96AJ1 413 aa25.96■■□□□ 1.75
FAM3A-217ENST00000457212 NLRP3Q96P20 1036 aa25.96■■□□□ 1.75
FAM3A-217ENST00000457212 SRCAPQ6ZRS2 3230 aa25.96■■□□□ 1.75
FAM3A-217ENST00000457212 LAMB2P55268 1798 aa25.95■■□□□ 1.75
FAM3A-217ENST00000457212 H0YIN7 160 aa25.95■■□□□ 1.74
FAM3A-217ENST00000457212 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.74
FAM3A-217ENST00000457212 UBE3BQ7Z3V4 1068 aa25.95■■□□□ 1.74
FAM3A-217ENST00000457212 TNNQ9UQP3 1299 aa25.95■■□□□ 1.74
FAM3A-217ENST00000457212 KIAA1551Q9HCM1 1747 aa25.94■■□□□ 1.74
FAM3A-217ENST00000457212 HCLS1P14317 486 aaPredicted RBP25.94■■□□□ 1.74
FAM3A-217ENST00000457212 C2CD5Q86YS7 1000 aa25.94■■□□□ 1.74
FAM3A-217ENST00000457212 DDX60Q8IY21 1712 aaKnown RBP25.94■■□□□ 1.74
FAM3A-217ENST00000457212 TNRC6CQ9HCJ0 1690 aaKnown RBP25.93■■□□□ 1.74
FAM3A-217ENST00000457212 UTYO14607 1347 aa25.93■■□□□ 1.74
FAM3A-217ENST00000457212 CASP7P55210 303 aa25.93■■□□□ 1.74
FAM3A-217ENST00000457212 NLGN2Q8NFZ4 835 aa25.93■■□□□ 1.74
FAM3A-217ENST00000457212 PDE8AO60658 829 aa25.92■■□□□ 1.74
FAM3A-217ENST00000457212 DPEP1P16444 411 aa25.92■■□□□ 1.74
FAM3A-217ENST00000457212 CRY2Q49AN0 593 aa25.92■■□□□ 1.74
FAM3A-217ENST00000457212 JARID2Q92833 1246 aaPredicted RBP25.92■■□□□ 1.74
FAM3A-217ENST00000457212 A0A0G2JLW4 131 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 PLIN1O60240 522 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 SRGNP10124 158 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 PDE3AQ14432 1141 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 TMEM57Q8N5G2 664 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 PLA2G12BQ9BX93 195 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 USP44Q9H0E7 712 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 DLEC1Q9Y238 1755 aa25.91■■□□□ 1.74
FAM3A-217ENST00000457212 CHRNA5P30532 468 aa25.9■■□□□ 1.74
FAM3A-217ENST00000457212 SF3B3Q15393 1217 aaKnown RBP25.9■■□□□ 1.74
FAM3A-217ENST00000457212 STYK1Q6J9G0 422 aa25.9■■□□□ 1.74
FAM3A-217ENST00000457212 COL11A2P13942 1736 aaPredicted RBP25.89■■□□□ 1.74
FAM3A-217ENST00000457212 RLBP1P12271 317 aa25.89■■□□□ 1.74
FAM3A-217ENST00000457212 NPR1P16066 1061 aa25.89■■□□□ 1.74
FAM3A-217ENST00000457212 KCNA3P22001 575 aa25.89■■□□□ 1.74
FAM3A-217ENST00000457212 MASTLQ96GX5 879 aa25.89■■□□□ 1.74
FAM3A-217ENST00000457212 HDAC5Q9UQL6 1122 aa25.89■■□□□ 1.74
FAM3A-217ENST00000457212 NBPF7P0C2Y1 421 aaPredicted RBP25.88■■□□□ 1.73
FAM3A-217ENST00000457212 RRP1P56182 461 aaKnown RBP25.88■■□□□ 1.73
FAM3A-217ENST00000457212 C3orf67Q6ZVT6 689 aa25.88■■□□□ 1.73
FAM3A-217ENST00000457212 RPGRQ92834 1020 aaKnown RBP25.88■■□□□ 1.73
FAM3A-217ENST00000457212 PIM2Q9P1W9 311 aa25.88■■□□□ 1.73
FAM3A-217ENST00000457212 MYH3P11055 1940 aa25.87■■□□□ 1.73
FAM3A-217ENST00000457212 HOXA10P31260 410 aaPredicted RBP25.87■■□□□ 1.73
FAM3A-217ENST00000457212 PANK1Q8TE04 598 aa25.87■■□□□ 1.73
FAM3A-217ENST00000457212 GNAI3P08754 354 aa25.86■■□□□ 1.73
FAM3A-217ENST00000457212 CNKSR1Q969H4 720 aa25.86■■□□□ 1.73
FAM3A-217ENST00000457212 ZNF622Q969S3 477 aaKnown RBP eCLIP25.86■■□□□ 1.73
FAM3A-217ENST00000457212 BRCA1P38398 1863 aaKnown RBP25.85■■□□□ 1.73
FAM3A-217ENST00000457212 UBTFL1P0CB47 393 aaPredicted RBP25.85■■□□□ 1.73
FAM3A-217ENST00000457212 ALDH1B1P30837 517 aa25.85■■□□□ 1.73
FAM3A-217ENST00000457212 CTSWP56202 376 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms