RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ST5P78524 1137 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 ERFEQ4G0M1 354 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 BCAR3O75815 825 aa18■□□□□ 0.47
SMPD4-215ENST00000457039 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-215ENST00000457039 NEURL1BA8MQ27 555 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 KCNA3P22001 575 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 LINS1Q8NG48 757 aa17.99■□□□□ 0.47
SMPD4-215ENST00000457039 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
SMPD4-215ENST00000457039 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
SMPD4-215ENST00000457039 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
SMPD4-215ENST00000457039 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
SMPD4-215ENST00000457039 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
SMPD4-215ENST00000457039 NPHP1O15259 732 aa17.98■□□□□ 0.47
SMPD4-215ENST00000457039 DPEP1P16444 411 aa17.98■□□□□ 0.47
SMPD4-215ENST00000457039 GTF2E1P29083 439 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-215ENST00000457039 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
SMPD4-215ENST00000457039 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
SMPD4-215ENST00000457039 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
SMPD4-215ENST00000457039 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 CHRNA5P30532 468 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 PDE6BP35913 854 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 SYNE4Q8N205 404 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-215ENST00000457039 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
SMPD4-215ENST00000457039 COL11A2P13942 1736 aaPredicted RBP17.97■□□□□ 0.47
SMPD4-215ENST00000457039 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
SMPD4-215ENST00000457039 GCKRQ14397 625 aa17.96■□□□□ 0.47
SMPD4-215ENST00000457039 FAM89AQ96GI7 184 aa17.96■□□□□ 0.47
SMPD4-215ENST00000457039 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
SMPD4-215ENST00000457039 BRCA1P38398 1863 aaKnown RBP17.95■□□□□ 0.46
SMPD4-215ENST00000457039 CRY2Q49AN0 593 aa17.95■□□□□ 0.46
SMPD4-215ENST00000457039 C3orf67Q6ZVT6 689 aa17.95■□□□□ 0.46
SMPD4-215ENST00000457039 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
SMPD4-215ENST00000457039 API5Q9BZZ5 524 aaKnown RBP17.95■□□□□ 0.46
SMPD4-215ENST00000457039 GOLGB1Q14789 3259 aaKnown RBP17.95■□□□□ 0.46
SMPD4-215ENST00000457039 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
SMPD4-215ENST00000457039 H0YIN7 160 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 SRGNP10124 158 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 CDHR2Q9BYE9 1310 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 LAMB2P55268 1798 aa17.94■□□□□ 0.46
SMPD4-215ENST00000457039 H7C1W4 665 aa17.93■□□□□ 0.46
SMPD4-215ENST00000457039 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-215ENST00000457039 CASP7P55210 303 aa17.93■□□□□ 0.46
SMPD4-215ENST00000457039 SRCIN1Q9C0H9 1055 aa17.93■□□□□ 0.46
SMPD4-215ENST00000457039 ABCC4O15439 1325 aa17.93■□□□□ 0.46
SMPD4-215ENST00000457039 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-215ENST00000457039 TRIM27P14373 513 aa17.92■□□□□ 0.46
SMPD4-215ENST00000457039 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-215ENST00000457039 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
SMPD4-215ENST00000457039 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
SMPD4-215ENST00000457039 NLRP3Q96P20 1036 aa17.92■□□□□ 0.46
SMPD4-215ENST00000457039 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
SMPD4-215ENST00000457039 IPO8O15397 1037 aaKnown RBP17.91■□□□□ 0.46
SMPD4-215ENST00000457039 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
SMPD4-215ENST00000457039 MASTLQ96GX5 879 aa17.91■□□□□ 0.46
SMPD4-215ENST00000457039 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
SMPD4-215ENST00000457039 TNNQ9UQP3 1299 aa17.91■□□□□ 0.46
SMPD4-215ENST00000457039 NPR1P16066 1061 aa17.9■□□□□ 0.46
SMPD4-215ENST00000457039 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-215ENST00000457039 SF3B3Q15393 1217 aaKnown RBP17.9■□□□□ 0.46
SMPD4-215ENST00000457039 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
SMPD4-215ENST00000457039 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
SMPD4-215ENST00000457039 YBX3P16989 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMPD4-215ENST00000457039 UBE3BQ7Z3V4 1068 aa17.89■□□□□ 0.45
SMPD4-215ENST00000457039 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
SMPD4-215ENST00000457039 UTYO14607 1347 aa17.89■□□□□ 0.45
SMPD4-215ENST00000457039 GRM8O00222 908 aa17.88■□□□□ 0.45
SMPD4-215ENST00000457039 PDE8AO60658 829 aa17.88■□□□□ 0.45
SMPD4-215ENST00000457039 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
SMPD4-215ENST00000457039 CCT4P50991 539 aaKnown RBP17.88■□□□□ 0.45
SMPD4-215ENST00000457039 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
SMPD4-215ENST00000457039 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
SMPD4-215ENST00000457039 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMPD4-215ENST00000457039 PLA2G12BQ9BX93 195 aa17.88■□□□□ 0.45
SMPD4-215ENST00000457039 UTRNP46939 3433 aa17.88■□□□□ 0.45
SMPD4-215ENST00000457039 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
SMPD4-215ENST00000457039 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
SMPD4-215ENST00000457039 BCS1LQ9Y276 419 aa17.87■□□□□ 0.45
SMPD4-215ENST00000457039 NBPF7P0C2Y1 421 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-215ENST00000457039 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
SMPD4-215ENST00000457039 CRAMP1Q96RY5 1269 aa17.86■□□□□ 0.45
SMPD4-215ENST00000457039 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
SMPD4-215ENST00000457039 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
SMPD4-215ENST00000457039 GPR162Q16538 588 aa17.85■□□□□ 0.45
SMPD4-215ENST00000457039 PRPF40BQ6NWY9 871 aaKnown RBP17.85■□□□□ 0.45
SMPD4-215ENST00000457039 SLX4Q8IY92 1834 aa17.85■□□□□ 0.45
SMPD4-215ENST00000457039 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
SMPD4-215ENST00000457039 RBM17Q96I25 401 aaKnown RBP17.85■□□□□ 0.45
SMPD4-215ENST00000457039 C9orf78Q9NZ63 289 aaPredicted RBP17.85■□□□□ 0.45
SMPD4-215ENST00000457039 RLBP1P12271 317 aa17.84■□□□□ 0.45
SMPD4-215ENST00000457039 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
SMPD4-215ENST00000457039 CTSWP56202 376 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms