RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 CCDC88AQ3V6T2 1871 aa34.42■■■■□ 3.1
SMIM12-205ENST00000456842 ANP32CO43423 234 aa34.42■■■■□ 3.1
SMIM12-205ENST00000456842 GNAI1P63096 354 aa34.42■■■■□ 3.1
SMIM12-205ENST00000456842 CALD1Q05682 793 aaKnown RBP34.41■■■■□ 3.1
SMIM12-205ENST00000456842 TCIRG1Q13488 830 aa34.41■■■■□ 3.1
SMIM12-205ENST00000456842 RPGRQ92834 1020 aaKnown RBP34.41■■■■□ 3.1
SMIM12-205ENST00000456842 MRS2Q9HD23 443 aa34.41■■■■□ 3.1
SMIM12-205ENST00000456842 HSP90AB3PQ58FF7 597 aa34.4■■■■□ 3.1
SMIM12-205ENST00000456842 NLRP10Q86W26 655 aa34.4■■■■□ 3.1
SMIM12-205ENST00000456842 RBM46Q8TBY0 533 aaKnown RBP34.4■■■■□ 3.1
SMIM12-205ENST00000456842 DBF4Q9UBU7 674 aaPredicted RBP34.4■■■■□ 3.1
SMIM12-205ENST00000456842 ARFGEF2Q9Y6D5 1785 aa34.39■■■■□ 3.1
SMIM12-205ENST00000456842 SLC51AQ86UW1 340 aa34.39■■■■□ 3.1
SMIM12-205ENST00000456842 SYNE4Q8N205 404 aa34.39■■■■□ 3.1
SMIM12-205ENST00000456842 ZNF277Q9NRM2 450 aaPredicted RBP34.39■■■■□ 3.1
SMIM12-205ENST00000456842 HOXA10P31260 410 aaPredicted RBP34.38■■■■□ 3.09
SMIM12-205ENST00000456842 FKBP4Q02790 459 aaKnown RBP eCLIP34.38■■■■□ 3.09
SMIM12-205ENST00000456842 C8orf58Q8NAV2 365 aa34.37■■■■□ 3.09
SMIM12-205ENST00000456842 RIC1Q4ADV7 1423 aa34.37■■■■□ 3.09
SMIM12-205ENST00000456842 TCERG1O14776 1098 aaKnown RBP34.36■■■■□ 3.09
SMIM12-205ENST00000456842 SLC10A5Q5PT55 438 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 DPY19L2Q6NUT2 758 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 ANKRD13DQ6ZTN6 518 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 RTKN2Q8IZC4 609 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 PLBD2Q8NHP8 589 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 RBM17Q96I25 401 aaKnown RBP34.36■■■■□ 3.09
SMIM12-205ENST00000456842 NLRP3Q96P20 1036 aa34.36■■■■□ 3.09
SMIM12-205ENST00000456842 TIAM2Q8IVF5 1701 aa34.35■■■■□ 3.09
SMIM12-205ENST00000456842 HCLS1P14317 486 aaPredicted RBP34.35■■■■□ 3.09
SMIM12-205ENST00000456842 VEGFAP15692 232 aaPredicted RBP34.35■■■■□ 3.09
SMIM12-205ENST00000456842 POTECB2RU33 542 aa34.34■■■■□ 3.09
SMIM12-205ENST00000456842 HYPKQ9NX55 129 aa34.34■■■■□ 3.09
SMIM12-205ENST00000456842 TRMT112Q9UI30 125 aaKnown RBP34.34■■■■□ 3.09
SMIM12-205ENST00000456842 DDNO94850 711 aaPredicted RBP34.33■■■■□ 3.09
SMIM12-205ENST00000456842 CRAMP1Q96RY5 1269 aa34.33■■■■□ 3.09
SMIM12-205ENST00000456842 ATP5J2-PTCD1G3V325 749 aa34.32■■■■□ 3.08
SMIM12-205ENST00000456842 TSR2Q969E8 191 aaKnown RBP34.31■■■■□ 3.08
SMIM12-205ENST00000456842 PHAXQ9H814 394 aaKnown RBP34.31■■■■□ 3.08
SMIM12-205ENST00000456842 TSPYL6Q8N831 410 aa34.3■■■■□ 3.08
SMIM12-205ENST00000456842 PPEF1O14829 653 aaPredicted RBP34.29■■■■□ 3.08
SMIM12-205ENST00000456842 WWC1Q8IX03 1113 aa34.29■■■■□ 3.08
SMIM12-205ENST00000456842 ISCA1Q9BUE6 129 aa34.29■■■■□ 3.08
SMIM12-205ENST00000456842 FSTL1Q12841 308 aa34.28■■■■□ 3.08
SMIM12-205ENST00000456842 SH3TC1Q8TE82 1336 aa34.28■■■■□ 3.08
SMIM12-205ENST00000456842 IARSP41252 1262 aaKnown RBP34.27■■■■□ 3.08
SMIM12-205ENST00000456842 SALL2Q9Y467 1007 aaPredicted RBP34.27■■■■□ 3.08
SMIM12-205ENST00000456842 DICER1Q9UPY3 1922 aaKnown RBP34.27■■■■□ 3.08
SMIM12-205ENST00000456842 SNED1Q8TER0 1413 aa34.27■■■■□ 3.08
SMIM12-205ENST00000456842 RNF123Q5XPI4 1314 aa34.27■■■■□ 3.08
SMIM12-205ENST00000456842 APLP1P51693 650 aa34.26■■■■□ 3.08
SMIM12-205ENST00000456842 CCDC27Q2M243 656 aa34.26■■■■□ 3.08
SMIM12-205ENST00000456842 CC2D2BQ6DHV5 1058 aa34.26■■■■□ 3.08
SMIM12-205ENST00000456842 CEP350Q5VT06 3117 aa34.26■■■■□ 3.07
SMIM12-205ENST00000456842 SMC1BQ8NDV3 1235 aa34.25■■■■□ 3.07
SMIM12-205ENST00000456842 PSMD1Q99460 953 aa34.25■■■■□ 3.07
SMIM12-205ENST00000456842 ABCC4O15439 1325 aa34.25■■■■□ 3.07
SMIM12-205ENST00000456842 ZNF541Q9H0D2 1346 aa34.25■■■■□ 3.07
SMIM12-205ENST00000456842 RIC3Q7Z5B4 369 aa34.24■■■■□ 3.07
SMIM12-205ENST00000456842 FAM89AQ96GI7 184 aa34.24■■■■□ 3.07
SMIM12-205ENST00000456842 ANKRD36CQ5JPF3 1778 aa34.23■■■■□ 3.07
SMIM12-205ENST00000456842 HTRA3P83110 453 aa34.23■■■■□ 3.07
SMIM12-205ENST00000456842 RTL5Q5HYW3 569 aaPredicted RBP34.23■■■■□ 3.07
SMIM12-205ENST00000456842 GOLGA2Q08379 1002 aa34.22■■■■□ 3.07
SMIM12-205ENST00000456842 CCDC30Q5VVM6 783 aa34.21■■■■□ 3.07
SMIM12-205ENST00000456842 WDR90Q96KV7 1748 aa34.21■■■■□ 3.07
SMIM12-205ENST00000456842 ATP6V0A2Q9Y487 856 aa34.2■■■■□ 3.07
SMIM12-205ENST00000456842 DDX46Q7L014 1031 aaKnown RBP34.18■■■■□ 3.06
SMIM12-205ENST00000456842 MYD88Q99836 296 aa34.18■■■■□ 3.06
SMIM12-205ENST00000456842 FZD9O00144 591 aa34.17■■■■□ 3.06
SMIM12-205ENST00000456842 POTEIP0CG38 1075 aa34.17■■■■□ 3.06
SMIM12-205ENST00000456842 POTEJP0CG39 1038 aa34.17■■■■□ 3.06
SMIM12-205ENST00000456842 TRIM28Q13263 835 aaKnown RBP34.17■■■■□ 3.06
SMIM12-205ENST00000456842 BBOX1O75936 387 aa34.16■■■■□ 3.06
SMIM12-205ENST00000456842 FAM9BQ8IZU0 186 aa34.16■■■■□ 3.06
SMIM12-205ENST00000456842 JDP2Q8WYK2 163 aa34.16■■■■□ 3.06
SMIM12-205ENST00000456842 TMX4Q9H1E5 349 aaPredicted RBP34.16■■■■□ 3.06
SMIM12-205ENST00000456842 GRIPAP1Q4V328 841 aa34.15■■■■□ 3.06
SMIM12-205ENST00000456842 LARGE2Q8N3Y3 721 aa34.15■■■■□ 3.06
SMIM12-205ENST00000456842 IL16Q14005 1332 aa34.14■■■■□ 3.06
SMIM12-205ENST00000456842 GRAPQ13588 217 aa34.14■■■■□ 3.06
SMIM12-205ENST00000456842 DNAJC5GQ8N7S2 189 aa34.14■■■■□ 3.06
SMIM12-205ENST00000456842 GRAPLQ8TC17 118 aaPredicted RBP34.14■■■■□ 3.06
SMIM12-205ENST00000456842 L3MBTL3Q96JM7 780 aaPredicted RBP34.14■■■■□ 3.06
SMIM12-205ENST00000456842 COL4A5P29400 1685 aa34.14■■■■□ 3.06
SMIM12-205ENST00000456842 TWISTNBQ3B726 338 aaPredicted RBP34.13■■■■□ 3.05
SMIM12-205ENST00000456842 SP8Q8IXZ3 490 aa34.13■■■■□ 3.05
SMIM12-205ENST00000456842 JARID2Q92833 1246 aaPredicted RBP34.13■■■■□ 3.05
SMIM12-205ENST00000456842 IRS4O14654 1257 aaPredicted RBP34.12■■■■□ 3.05
SMIM12-205ENST00000456842 NCBP3Q53F19 620 aaKnown RBP34.12■■■■□ 3.05
SMIM12-205ENST00000456842 LAMB2P55268 1798 aa34.11■■■■□ 3.05
SMIM12-205ENST00000456842 CHMP4AQ9BY43 222 aa34.11■■■■□ 3.05
SMIM12-205ENST00000456842 TAF1DQ9H5J8 278 aaPredicted RBP34.11■■■■□ 3.05
SMIM12-205ENST00000456842 IQCA1LA6NCM1 817 aa34.1■■■■□ 3.05
SMIM12-205ENST00000456842 PPIP5K2O43314 1243 aa34.1■■■■□ 3.05
SMIM12-205ENST00000456842 SF3B3Q15393 1217 aaKnown RBP34.1■■■■□ 3.05
SMIM12-205ENST00000456842 AOC3Q16853 763 aa34.1■■■■□ 3.05
SMIM12-205ENST00000456842 METTL22Q9BUU2 404 aaPredicted RBP34.1■■■■□ 3.05
SMIM12-205ENST00000456842 MAP3K2Q9Y2U5 619 aa34.1■■■■□ 3.05
SMIM12-205ENST00000456842 GJA3Q9Y6H8 435 aa34.1■■■■□ 3.05
SMIM12-205ENST00000456842 FANCIQ9NVI1 1328 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms