RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-215ENST00000456545 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
PDLIM2-215ENST00000456545 SLC4A2P04920 1241 aa23.2■■□□□ 1.3
PDLIM2-215ENST00000456545 C9orf131Q5VYM1 1079 aa23.2■■□□□ 1.3
PDLIM2-215ENST00000456545 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-215ENST00000456545 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
PDLIM2-215ENST00000456545 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
PDLIM2-215ENST00000456545 SOGA3Q5TF21 947 aa23.19■■□□□ 1.3
PDLIM2-215ENST00000456545 MIER1Q8N108 512 aa23.19■■□□□ 1.3
PDLIM2-215ENST00000456545 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-215ENST00000456545 ABCC12Q96J65 1359 aa23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 SH3TC1Q8TE82 1336 aa23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 ZNF526Q8TF50 670 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 RBM17Q96I25 401 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 MYD88Q99836 296 aa23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 ANKRD36CQ5JPF3 1778 aa23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 COL11A2P13942 1736 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-215ENST00000456545 VAMP4O75379 141 aa23.17■■□□□ 1.3
PDLIM2-215ENST00000456545 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
PDLIM2-215ENST00000456545 ISCA1Q9BUE6 129 aa23.17■■□□□ 1.3
PDLIM2-215ENST00000456545 UTRNP46939 3433 aa23.17■■□□□ 1.3
PDLIM2-215ENST00000456545 CACNA1SQ13698 1873 aa23.16■■□□□ 1.3
PDLIM2-215ENST00000456545 RASSF7Q02833 373 aa23.16■■□□□ 1.3
PDLIM2-215ENST00000456545 GPBP1L1Q9HC44 474 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-215ENST00000456545 HCLS1P14317 486 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 LMNB1P20700 586 aa23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 CRY2Q49AN0 593 aa23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 KSR2Q6VAB6 950 aa23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
PDLIM2-215ENST00000456545 PI4KAP2A4QPH2 592 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 RTL5Q5HYW3 569 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 SYNE4Q8N205 404 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 PI4KAP1Q8N8J0 262 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 FAM89AQ96GI7 184 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 METTL22Q9BUU2 404 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 SLX4Q8IY92 1834 aa23.14■■□□□ 1.29
PDLIM2-215ENST00000456545 E9PSI1 815 aa23.13■■□□□ 1.29
PDLIM2-215ENST00000456545 TRIM28Q13263 835 aaKnown RBP23.13■■□□□ 1.29
PDLIM2-215ENST00000456545 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
PDLIM2-215ENST00000456545 RIC1Q4ADV7 1423 aa23.13■■□□□ 1.29
PDLIM2-215ENST00000456545 ZNF521Q96K83 1311 aa23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 FKBP5Q13451 457 aaPredicted RBP23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 G2E3Q7L622 706 aa23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 TAOK3Q9H2K8 898 aa23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
PDLIM2-215ENST00000456545 HSP90B1P14625 803 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-215ENST00000456545 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-215ENST00000456545 FLIIQ13045 1269 aa23.11■■□□□ 1.29
PDLIM2-215ENST00000456545 CCDC191Q8NCU4 936 aa23.11■■□□□ 1.29
PDLIM2-215ENST00000456545 CWC25Q9NXE8 425 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-215ENST00000456545 TNRC6CQ9HCJ0 1690 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 NFKBIEO00221 500 aa23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 C3orf67Q6ZVT6 689 aa23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 ADCY9O60503 1353 aa23.1■■□□□ 1.29
PDLIM2-215ENST00000456545 IRS4O14654 1257 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 PPEF1O14829 653 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 CC2D2BQ6DHV5 1058 aa23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 ZBTB38Q8NAP3 1195 aaPredicted RBP23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 C7orf43Q8WVR3 580 aa23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 SBF1O95248 1867 aa23.08■■□□□ 1.29
PDLIM2-215ENST00000456545 CACNA1FO60840 1977 aa23.07■■□□□ 1.28
PDLIM2-215ENST00000456545 CCDC88AQ3V6T2 1871 aa23.07■■□□□ 1.28
PDLIM2-215ENST00000456545 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
PDLIM2-215ENST00000456545 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
PDLIM2-215ENST00000456545 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
PDLIM2-215ENST00000456545 BBOX1O75936 387 aa23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 PCCAP05165 728 aaPredicted RBP23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 FKBP4Q02790 459 aaKnown RBP eCLIP23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 GRIPAP1Q4V328 841 aa23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 DNAAF4Q8WXU2 420 aa23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 CDCA7LQ96GN5 454 aa23.05■■□□□ 1.28
PDLIM2-215ENST00000456545 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
PDLIM2-215ENST00000456545 FER1L6Q2WGJ9 1857 aa23.04■■□□□ 1.28
PDLIM2-215ENST00000456545 ABCC4O15439 1325 aa23.04■■□□□ 1.28
PDLIM2-215ENST00000456545 PRELPP51888 382 aa23.03■■□□□ 1.28
PDLIM2-215ENST00000456545 CWF19L2Q2TBE0 894 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-215ENST00000456545 DPY19L2Q6NUT2 758 aa23.03■■□□□ 1.28
PDLIM2-215ENST00000456545 ZC3H4Q9UPT8 1303 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-215ENST00000456545 IGKV5-2P06315 115 aa23.02■■□□□ 1.28
PDLIM2-215ENST00000456545 GRAPQ13588 217 aa23.02■■□□□ 1.28
PDLIM2-215ENST00000456545 SF3B3Q15393 1217 aaKnown RBP23.02■■□□□ 1.28
PDLIM2-215ENST00000456545 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-215ENST00000456545 NEURL1BA8MQ27 555 aa23.01■■□□□ 1.27
PDLIM2-215ENST00000456545 PDE8AO60658 829 aa23.01■■□□□ 1.27
PDLIM2-215ENST00000456545 ZNF277Q9NRM2 450 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-215ENST00000456545 ATP6V0A2Q9Y487 856 aa23.01■■□□□ 1.27
PDLIM2-215ENST00000456545 LAMB2P55268 1798 aa23■■□□□ 1.27
PDLIM2-215ENST00000456545 HNRNPUQ00839 825 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDLIM2-215ENST00000456545 CCDC152Q4G0S7 254 aa22.99■■□□□ 1.27
PDLIM2-215ENST00000456545 TMC4Q7Z404 712 aa22.99■■□□□ 1.27
PDLIM2-215ENST00000456545 SP8Q8IXZ3 490 aa22.99■■□□□ 1.27
PDLIM2-215ENST00000456545 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
PDLIM2-215ENST00000456545 LINS1Q8NG48 757 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms