RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 VEGFBP49765 207 aa15.82■□□□□ 0.12
LMCD1-206ENST00000456506 ZNF34Q8IZ26 560 aa15.82■□□□□ 0.12
LMCD1-206ENST00000456506 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
LMCD1-206ENST00000456506 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
LMCD1-206ENST00000456506 C3orf67Q6ZVT6 689 aa15.81■□□□□ 0.12
LMCD1-206ENST00000456506 GPC2Q8N158 579 aa15.81■□□□□ 0.12
LMCD1-206ENST00000456506 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
LMCD1-206ENST00000456506 DUOX1Q9NRD9 1551 aa15.8■□□□□ 0.12
LMCD1-206ENST00000456506 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
LMCD1-206ENST00000456506 NTSR2O95665 410 aa15.8■□□□□ 0.12
LMCD1-206ENST00000456506 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
LMCD1-206ENST00000456506 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
LMCD1-206ENST00000456506 NYXQ9GZU5 481 aa15.8■□□□□ 0.12
LMCD1-206ENST00000456506 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
LMCD1-206ENST00000456506 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
LMCD1-206ENST00000456506 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
LMCD1-206ENST00000456506 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
LMCD1-206ENST00000456506 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
LMCD1-206ENST00000456506 COL4A1P02462 1669 aa15.79■□□□□ 0.12
LMCD1-206ENST00000456506 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 GPTP24298 496 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 SCNN1DP51172 638 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 PDIA6Q15084 440 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 ZBTB3Q9H5J0 574 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 WBP1LQ9NX94 342 aa15.78■□□□□ 0.12
LMCD1-206ENST00000456506 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
LMCD1-206ENST00000456506 POLR2AP24928 1970 aaKnown RBP15.78■□□□□ 0.12
LMCD1-206ENST00000456506 MYL6BP14649 208 aa15.77■□□□□ 0.12
LMCD1-206ENST00000456506 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
LMCD1-206ENST00000456506 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.12
LMCD1-206ENST00000456506 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
LMCD1-206ENST00000456506 PSME4Q14997 1843 aa15.75■□□□□ 0.11
LMCD1-206ENST00000456506 FMR1Q06787 632 aaKnown RBP eCLIP15.75■□□□□ 0.11
LMCD1-206ENST00000456506 GRIPAP1Q4V328 841 aa15.75■□□□□ 0.11
LMCD1-206ENST00000456506 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
LMCD1-206ENST00000456506 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
LMCD1-206ENST00000456506 RPGRQ92834 1020 aaKnown RBP15.75■□□□□ 0.11
LMCD1-206ENST00000456506 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
LMCD1-206ENST00000456506 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
LMCD1-206ENST00000456506 EPS15P42566 896 aa15.74■□□□□ 0.11
LMCD1-206ENST00000456506 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
LMCD1-206ENST00000456506 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
LMCD1-206ENST00000456506 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
LMCD1-206ENST00000456506 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
LMCD1-206ENST00000456506 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
LMCD1-206ENST00000456506 DEFB115Q30KQ5 88 aa15.73■□□□□ 0.11
LMCD1-206ENST00000456506 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
LMCD1-206ENST00000456506 GJA3Q9Y6H8 435 aa15.73■□□□□ 0.11
LMCD1-206ENST00000456506 SCN9AQ15858 1988 aa15.73■□□□□ 0.11
LMCD1-206ENST00000456506 ABCC4O15439 1325 aa15.72■□□□□ 0.11
LMCD1-206ENST00000456506 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
LMCD1-206ENST00000456506 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
LMCD1-206ENST00000456506 CST9Q5W186 159 aa15.72■□□□□ 0.11
LMCD1-206ENST00000456506 LARGE2Q8N3Y3 721 aa15.72■□□□□ 0.11
LMCD1-206ENST00000456506 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
LMCD1-206ENST00000456506 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
LMCD1-206ENST00000456506 ZNF646O15015 1829 aaPredicted RBP15.72■□□□□ 0.11
LMCD1-206ENST00000456506 ANXA1P04083 346 aa15.71■□□□□ 0.11
LMCD1-206ENST00000456506 LBX1P52954 281 aa15.71■□□□□ 0.11
LMCD1-206ENST00000456506 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
LMCD1-206ENST00000456506 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
LMCD1-206ENST00000456506 AOC3Q16853 763 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
LMCD1-206ENST00000456506 VPS33BQ9H267 617 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
LMCD1-206ENST00000456506 TRAF5O00463 557 aa15.69■□□□□ 0.1
LMCD1-206ENST00000456506 NEFMP07197 916 aa15.69■□□□□ 0.1
LMCD1-206ENST00000456506 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
LMCD1-206ENST00000456506 CXCL9Q07325 125 aa15.69■□□□□ 0.1
LMCD1-206ENST00000456506 AIDAQ96BJ3 306 aa15.69■□□□□ 0.1
LMCD1-206ENST00000456506 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
LMCD1-206ENST00000456506 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
LMCD1-206ENST00000456506 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
LMCD1-206ENST00000456506 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
LMCD1-206ENST00000456506 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
LMCD1-206ENST00000456506 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
LMCD1-206ENST00000456506 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
LMCD1-206ENST00000456506 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
LMCD1-206ENST00000456506 CAPNS2Q96L46 248 aa15.67■□□□□ 0.1
LMCD1-206ENST00000456506 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
LMCD1-206ENST00000456506 ZNRF3Q9ULT6 936 aa15.67■□□□□ 0.1
LMCD1-206ENST00000456506 ABT1Q9ULW3 272 aaKnown RBP15.67■□□□□ 0.1
LMCD1-206ENST00000456506 TLL2Q9Y6L7 1015 aa15.67■□□□□ 0.1
LMCD1-206ENST00000456506 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
LMCD1-206ENST00000456506 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
LMCD1-206ENST00000456506 RIPK4P57078 832 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 MAP2K1Q02750 393 aaPredicted RBP15.66■□□□□ 0.1
LMCD1-206ENST00000456506 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 CYP4F22Q6NT55 531 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
LMCD1-206ENST00000456506 MYH3P11055 1940 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms