RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SH3TC1Q8TE82 1336 aa13.24□□□□□ -0.29
TOP3B-212ENST00000456075 VAMP4O75379 141 aa13.24□□□□□ -0.29
TOP3B-212ENST00000456075 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
TOP3B-212ENST00000456075 FKBP5Q13451 457 aaPredicted RBP13.24□□□□□ -0.29
TOP3B-212ENST00000456075 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
TOP3B-212ENST00000456075 MYD88Q99836 296 aa13.24□□□□□ -0.29
TOP3B-212ENST00000456075 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
TOP3B-212ENST00000456075 CHD4Q14839 1912 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
TOP3B-212ENST00000456075 FLIIQ13045 1269 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 PRPF40BQ6NWY9 871 aaKnown RBP13.23□□□□□ -0.29
TOP3B-212ENST00000456075 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 MAP3K2Q9Y2U5 619 aa13.23□□□□□ -0.29
TOP3B-212ENST00000456075 BRCA1P38398 1863 aaKnown RBP13.23□□□□□ -0.29
TOP3B-212ENST00000456075 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 C21orf2O43822 256 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 RBM17Q96I25 401 aaKnown RBP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 TMX4Q9H1E5 349 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 COL11A2P13942 1736 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-212ENST00000456075 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
TOP3B-212ENST00000456075 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
TOP3B-212ENST00000456075 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
TOP3B-212ENST00000456075 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
TOP3B-212ENST00000456075 FAM89AQ96GI7 184 aa13.21□□□□□ -0.29
TOP3B-212ENST00000456075 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
TOP3B-212ENST00000456075 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 G2E3Q7L622 706 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
TOP3B-212ENST00000456075 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
TOP3B-212ENST00000456075 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
TOP3B-212ENST00000456075 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
TOP3B-212ENST00000456075 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 LMNB1P20700 586 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 RASSF7Q02833 373 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
TOP3B-212ENST00000456075 DNAAF4Q8WXU2 420 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 ADCY9O60503 1353 aa13.18□□□□□ -0.3
TOP3B-212ENST00000456075 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-212ENST00000456075 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-212ENST00000456075 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
TOP3B-212ENST00000456075 RTKN2Q8IZC4 609 aa13.17□□□□□ -0.3
TOP3B-212ENST00000456075 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-212ENST00000456075 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-212ENST00000456075 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
TOP3B-212ENST00000456075 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
TOP3B-212ENST00000456075 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
TOP3B-212ENST00000456075 CACNA1SQ13698 1873 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 NFKBIEO00221 500 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 LINS1Q8NG48 757 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-212ENST00000456075 SLX4Q8IY92 1834 aa13.15□□□□□ -0.3
TOP3B-212ENST00000456075 ABCC4O15439 1325 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 F6X3S4 739 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 BBOX1O75936 387 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 ALDH1L2Q3SY69 923 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
TOP3B-212ENST00000456075 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-212ENST00000456075 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
TOP3B-212ENST00000456075 PTPRCP08575 1304 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 LTBP3Q9NS15 1303 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 PDE8AO60658 829 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
TOP3B-212ENST00000456075 GRAPQ13588 217 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 GCKRQ14397 625 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
TOP3B-212ENST00000456075 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 UBE3BQ7Z3V4 1068 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
TOP3B-212ENST00000456075 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
TOP3B-212ENST00000456075 C7orf43Q8WVR3 580 aa13.13□□□□□ -0.31
TOP3B-212ENST00000456075 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms