RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 RNF112Q9ULX5 631 aa7.64□□□□□ -1.19
R3HDM1-212ENST00000456040 PALM3A6NDB9 673 aaPredicted RBP7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 PPP1R12CQ9BZL4 782 aa7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 UBE2OQ9C0C9 1292 aaKnown RBP7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 IGFLR1Q9H665 355 aa7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 SCHIP1Q9P0W5 487 aaPredicted RBP7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 KCNH4Q9UQ05 1017 aa7.63□□□□□ -1.19
R3HDM1-212ENST00000456040 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 EML1O00423 815 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 YBX3P16989 372 aaKnown RBP eCLIP7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 BRD7Q9NPI1 651 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 PCMTD2Q9NV79 361 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 MAFBQ9Y5Q3 323 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
R3HDM1-212ENST00000456040 RAB44Q7Z6P3 723 aaPredicted RBP7.61□□□□□ -1.19
R3HDM1-212ENST00000456040 BHMTQ93088 406 aa7.61□□□□□ -1.19
R3HDM1-212ENST00000456040 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 SHISA2Q6UWI4 295 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 LARGE2Q8N3Y3 721 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 OGFOD1Q8N543 542 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 TPCN2Q8NHX9 752 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 EFCC1Q9HA90 598 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 ZNF358Q9NW07 568 aa7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
R3HDM1-212ENST00000456040 SFI1A8K8P3 1242 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 CLDN10P78369 228 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 NUDT8Q8WV74 236 aa7.59□□□□□ -1.19
R3HDM1-212ENST00000456040 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 RASA1P20936 1047 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 KCNQ4P56696 695 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 SLC9A9Q8IVB4 645 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 FMR1NBQ8N0W7 255 aaPredicted RBP7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 PNMA5Q96PV4 448 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 KIAA1024Q9UPX6 916 aa7.58□□□□□ -1.2
R3HDM1-212ENST00000456040 COL17A1Q9UMD9 1497 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 PCSK7Q16549 785 aa7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 DTWD1Q8N5C7 304 aa7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 ZNF594Q96JF6 807 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
R3HDM1-212ENST00000456040 IRAK1P51617 712 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 HIF1AQ16665 826 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 PSAPL1Q6NUJ1 521 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 SIX5Q8N196 739 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 WFDC12Q8WWY7 111 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
R3HDM1-212ENST00000456040 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 M0R2N6 131 aa7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 IREB2P48200 963 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 PSMA6P60900 246 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 TNS4Q8IZW8 715 aa7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-212ENST00000456040 AFF1P51825 1210 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-212ENST00000456040 EPHA4P54764 986 aa7.54□□□□□ -1.2
R3HDM1-212ENST00000456040 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
R3HDM1-212ENST00000456040 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
R3HDM1-212ENST00000456040 FAM196BA6NMK8 535 aa7.53□□□□□ -1.2
R3HDM1-212ENST00000456040 SEC13P55735 322 aa7.53□□□□□ -1.2
R3HDM1-212ENST00000456040 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
R3HDM1-212ENST00000456040 PTCD1O75127 700 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 DKK1O94907 266 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 TYRO3Q06418 890 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 PTK7Q13308 1070 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 SUSD3Q96L08 255 aa7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 DNAJB12Q9NXW2 375 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L15C9J2P7 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L10C9JJH3 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L13C9JLJ4 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L12C9JPN9 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L11C9JVI0 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L21D6R901 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L18D6R9N7 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L22D6RA61 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L17D6RBQ6 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L19D6RCP7 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L20D6RJB6 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 RFX1P22670 979 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 SSTR4P31391 388 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 USP17L24Q0WX57 530 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 PRR23CQ6ZRP0 262 aa7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-212ENST00000456040 HSH2DQ96JZ2 352 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms