RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 C21orf2O43822 256 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 KCNA6P17658 529 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 EML3Q32P44 896 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 THSD4Q6ZMP0 1018 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 NOL8Q76FK4 1167 aaKnown RBP6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 TRIM50Q86XT4 487 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 ARMC2Q8NEN0 867 aa6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 ZNF594Q96JF6 807 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 USB1Q9BQ65 265 aaKnown RBP6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.3
HMGB1P4-201ENST00000455362 LMTK3Q96Q04 1460 aa6.9□□□□□ -1.31
HMGB1P4-201ENST00000455362 TULP4Q9NRJ4 1543 aa6.9□□□□□ -1.31
HMGB1P4-201ENST00000455362 SOWAHBA6NEL2 793 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 WASLO00401 505 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 ATP1A2P50993 1020 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 PTK2Q05397 1052 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 TMC1Q8TDI8 760 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 CARD14Q9BXL6 1004 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 PRKRIP1Q9H875 184 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 MYOM1P52179 1685 aa6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 XRN1Q8IZH2 1706 aaKnown RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P4-201ENST00000455362 STRCQ7RTU9 1775 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 PTCH1Q13635 1447 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 CTHP32929 405 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 LRCH3Q96II8 777 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 PRIMPOLQ96LW4 560 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 CUEDC1Q9NWM3 386 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 SALL2Q9Y467 1007 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 GPSM3Q9Y4H4 160 aa6.88□□□□□ -1.31
HMGB1P4-201ENST00000455362 ATAD2Q6PL18 1390 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 ATP2B1P20020 1258 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 BCAMP50895 628 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 KCNH2Q12809 1159 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 PTPRNQ16849 979 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 ZNF662Q6ZS27 426 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 TMEM87AQ8NBN3 555 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 WNT2BQ93097 391 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 PRKAG2Q9UGJ0 569 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 KNSTRNQ9Y448 316 aa6.87□□□□□ -1.31
HMGB1P4-201ENST00000455362 NINLQ9Y2I6 1382 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 MARCH6O60337 910 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 JUNDP17535 347 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 GTF2F1P35269 517 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 XPCQ01831 940 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 FKBP4Q02790 459 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 CNGB1Q14028 1251 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 MRPL58Q14197 206 aaKnown RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 NT5DC4Q86YG4 428 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 GTF3C2Q8WUA4 911 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 CCSER2Q9H7U1 834 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 CEP126Q9P2H0 1117 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
HMGB1P4-201ENST00000455362 KTN1Q86UP2 1357 aaKnown RBP6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 NR1I2O75469 434 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 SEC13P55735 322 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 CLDN10P78369 228 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 RALBP1Q15311 655 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 NBPF14Q5TI25 921 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 CERS3Q8IU89 383 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 LARGE2Q8N3Y3 721 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 CAPN10Q9HC96 672 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 TERF2IPQ9NYB0 399 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 ADGRB2O60241 1585 aa6.85□□□□□ -1.31
HMGB1P4-201ENST00000455362 ANKRD36BQ8N2N9 1353 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 NPC1L1Q9UHC9 1359 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 PRR36Q9H6K5 1346 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 TLDC2A0PJX2 215 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 FGD1P98174 961 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 RAD51AP2Q09MP3 1159 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 GNL2Q13823 731 aaKnown RBP6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 OCLNQ16625 522 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 CC2D1BQ5T0F9 858 aaKnown RBP6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 PDXDC2PQ6P474 469 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 NLRP2Q9NX02 1062 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms