RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
NIF3L1-209ENST00000454952 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-209ENST00000454952 PRAMEF22A3QJZ6 481 aa10.61□□□□□ -0.71
NIF3L1-209ENST00000454952 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-209ENST00000454952 JDP2Q8WYK2 163 aa10.61□□□□□ -0.71
NIF3L1-209ENST00000454952 PSMD1Q99460 953 aa10.61□□□□□ -0.71
NIF3L1-209ENST00000454952 KDM3BQ7LBC6 1761 aa10.61□□□□□ -0.71
NIF3L1-209ENST00000454952 ERBB4Q15303 1308 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 PASKQ96RG2 1323 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 RIC1Q4ADV7 1423 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 CRY2Q49AN0 593 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 GPC2Q8N158 579 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 RPGRQ92834 1020 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 ZNF277Q9NRM2 450 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
NIF3L1-209ENST00000454952 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 FAM177BA6PVY3 158 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 FZD9O00144 591 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 EPHX2P34913 555 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 EIF6P56537 245 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 HLFQ16534 295 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
NIF3L1-209ENST00000454952 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.71
NIF3L1-209ENST00000454952 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.71
NIF3L1-209ENST00000454952 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-209ENST00000454952 HOXA10P31260 410 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-209ENST00000454952 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
NIF3L1-209ENST00000454952 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-209ENST00000454952 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 ITGBL1O95965 494 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 CTCFP49711 727 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 PPP1R42Q7Z4L9 355 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 NGEFQ8N5V2 710 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 VPS33BQ9H267 617 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 MIS18AQ9NYP9 233 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
NIF3L1-209ENST00000454952 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
NIF3L1-209ENST00000454952 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
NIF3L1-209ENST00000454952 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
NIF3L1-209ENST00000454952 BABAM1Q9NWV8 329 aa10.56□□□□□ -0.72
NIF3L1-209ENST00000454952 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-209ENST00000454952 ABCC12Q96J65 1359 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 MYL6BP14649 208 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 GIGYF2Q6Y7W6 1299 aaKnown RBP10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 NIM1KQ8IY84 436 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 SUPT20HQ8NEM7 779 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 PLEKHF1Q96S99 279 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 SNED1Q8TER0 1413 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 PCNTO95613 3336 aa10.55□□□□□ -0.72
NIF3L1-209ENST00000454952 RASSF10A6NK89 507 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 GPTP24298 496 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 VEGFBP49765 207 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 MAP2K1Q02750 393 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 SUSD4Q5VX71 490 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 TTLL7Q6ZT98 887 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 ZNF34Q8IZ26 560 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 TRPM7Q96QT4 1865 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 ZBTB3Q9H5J0 574 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 TSPYL4Q9UJ04 414 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 GJA3Q9Y6H8 435 aa10.54□□□□□ -0.72
NIF3L1-209ENST00000454952 FOXN1O15353 648 aa10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 NTSR2O95665 410 aa10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 ECE1P42892 770 aa10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 MAP1SQ66K74 1059 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 UBN2Q6ZU65 1347 aa10.53□□□□□ -0.72
NIF3L1-209ENST00000454952 ANKRD36CQ5JPF3 1778 aa10.52□□□□□ -0.72
NIF3L1-209ENST00000454952 PPIP5K2O43314 1243 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 BBOX1O75936 387 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 SLC10A5Q5PT55 438 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 DDX21Q9NR30 783 aaKnown RBP eCLIP10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 WBP1LQ9NX94 342 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 ATP6V0A2Q9Y487 856 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 CDHR2Q9BYE9 1310 aa10.52□□□□□ -0.73
NIF3L1-209ENST00000454952 TMC4Q7Z404 712 aa10.51□□□□□ -0.73
NIF3L1-209ENST00000454952 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-209ENST00000454952 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-209ENST00000454952 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms