RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PHF14O94880 888 aa12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 SSFA2P28290 1259 aa12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 AK7Q96M32 723 aa12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
GTF3C2-206ENST00000454704 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 MBD3O95983 291 aa12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 CUL4AQ13619 759 aa12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 PIGBQ92521 554 aa12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
GTF3C2-206ENST00000454704 POLA2Q14181 598 aa12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 AMOTQ4VCS5 1084 aa12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 OTUD7AQ8TE49 926 aaPredicted RBP12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
GTF3C2-206ENST00000454704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 F6X3S4 739 aa12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
GTF3C2-206ENST00000454704 CHMLP26374 656 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 TTC41PQ6P2S7 1318 aa12.81□□□□□ -0.36
GTF3C2-206ENST00000454704 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 SIK1P57059 783 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 MTX1Q13505 466 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 ADCY9O60503 1353 aa12.8□□□□□ -0.36
GTF3C2-206ENST00000454704 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 GNPATO15228 680 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 NEK4P51957 841 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 ITPK1Q13572 414 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 PANK2Q9BZ23 570 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
GTF3C2-206ENST00000454704 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 ESPNB1AK53 854 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 APBB1O00213 710 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 BRD1O95696 1058 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 PHKG2P15735 406 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 HSPA4P34932 840 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 NASPP49321 788 aaPredicted RBP12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
GTF3C2-206ENST00000454704 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 RAD50Q92878 1312 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 TEFQ10587 303 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 RHPN1Q8TCX5 695 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.37
GTF3C2-206ENST00000454704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.375e-6■■□□□ 13.1
GTF3C2-206ENST00000454704 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 GLRX3O76003 335 aaKnown RBP12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 GAS2L3Q86XJ1 694 aa12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 CICQ96RK0 1608 aaPredicted RBP12.76□□□□□ -0.37
GTF3C2-206ENST00000454704 HIP1O00291 1037 aa12.75□□□□□ -0.37
GTF3C2-206ENST00000454704 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
GTF3C2-206ENST00000454704 PPP1R42Q7Z4L9 355 aa12.75□□□□□ -0.37
GTF3C2-206ENST00000454704 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
GTF3C2-206ENST00000454704 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
GTF3C2-206ENST00000454704 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 SGSM2O43147 1006 aa12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 MMP10P09238 476 aa12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms