RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 CSRNP1Q96S65 589 aa8.33□□□□□ -1.08
CDH19-202ENST00000454642 EIF1AYO14602 144 aaKnown RBP8.32□□□□□ -1.08
CDH19-202ENST00000454642 AVPP01185 164 aa8.32□□□□□ -1.08
CDH19-202ENST00000454642 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
CDH19-202ENST00000454642 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
CDH19-202ENST00000454642 CFHR5Q9BXR6 569 aa8.32□□□□□ -1.08
CDH19-202ENST00000454642 RNF144AP50876 292 aaPredicted RBP8.31□□□□□ -1.08
CDH19-202ENST00000454642 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
CDH19-202ENST00000454642 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
CDH19-202ENST00000454642 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
CDH19-202ENST00000454642 SUSD3Q96L08 255 aa8.31□□□□□ -1.08
CDH19-202ENST00000454642 TSEN34Q9BSV6 310 aaKnown RBP8.31□□□□□ -1.08
CDH19-202ENST00000454642 TGFBR3LH3BV60 316 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 OPLAHO14841 1288 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 GNA15P30679 374 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 GPC1P35052 558 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 POU4F2Q12837 409 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 PIK3R5Q8WYR1 880 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 DRC1Q96MC2 740 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
CDH19-202ENST00000454642 IDH3AP50213 366 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 FANCCQ00597 558 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 FAM13BQ9NYF5 915 aa8.3□□□□□ -1.08
CDH19-202ENST00000454642 FOXD3Q9UJU5 478 aaPredicted RBP8.29□□□□□ -1.08
CDH19-202ENST00000454642 SPINT1O43278 529 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 UPP2O95045 317 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 ITGAEP38570 1179 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 RAD51AP2Q09MP3 1159 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
CDH19-202ENST00000454642 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 PI16Q6UXB8 463 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 METTL16Q86W50 562 aaKnown RBP8.28□□□□□ -1.08
CDH19-202ENST00000454642 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
CDH19-202ENST00000454642 RNF34Q969K3 372 aa8.28□□□□□ -1.08
CDH19-202ENST00000454642 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.08
CDH19-202ENST00000454642 BMP2P12643 396 aa8.27□□□□□ -1.08
CDH19-202ENST00000454642 ZNF76P36508 570 aa8.27□□□□□ -1.08
CDH19-202ENST00000454642 LRRC69Q6ZNQ3 347 aa8.27□□□□□ -1.08
CDH19-202ENST00000454642 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.08
CDH19-202ENST00000454642 ZDHHC3Q9NYG2 299 aa8.27□□□□□ -1.08
CDH19-202ENST00000454642 DMGDHQ9UI17 866 aaKnown RBP8.27□□□□□ -1.08
CDH19-202ENST00000454642 CAPN5O15484 640 aaPredicted RBP8.27□□□□□ -1.09
CDH19-202ENST00000454642 IRS1P35568 1242 aa8.27□□□□□ -1.09
CDH19-202ENST00000454642 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
CDH19-202ENST00000454642 HIF1AQ16665 826 aa8.27□□□□□ -1.09
CDH19-202ENST00000454642 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDH19-202ENST00000454642 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
CDH19-202ENST00000454642 FBF1Q8TES7 1133 aa8.27□□□□□ -1.09
CDH19-202ENST00000454642 RTCBQ9Y3I0 505 aaKnown RBP8.27□□□□□ -1.09
CDH19-202ENST00000454642 TNFRSF21O75509 655 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 RPLP1P05386 114 aaKnown RBP8.26□□□□□ -1.09
CDH19-202ENST00000454642 NEFLP07196 543 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 CTSHP09668 335 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 RHOQP17081 205 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 ATP4AP20648 1035 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 TRIP4Q15650 581 aaPredicted RBP8.26□□□□□ -1.09
CDH19-202ENST00000454642 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 BTLAQ7Z6A9 289 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 EPS8L3Q8TE67 593 aaKnown RBP8.26□□□□□ -1.09
CDH19-202ENST00000454642 SPG7Q9UQ90 795 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 AK5Q9Y6K8 562 aa8.26□□□□□ -1.09
CDH19-202ENST00000454642 SPATA31C2B4DYI2 1134 aa8.25□□□□□ -1.09
CDH19-202ENST00000454642 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
CDH19-202ENST00000454642 ARSDP51689 593 aa8.25□□□□□ -1.09
CDH19-202ENST00000454642 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
CDH19-202ENST00000454642 DNAJC25Q9H1X3 360 aa8.25□□□□□ -1.09
CDH19-202ENST00000454642 INPP5BP32019 993 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 CRELD1Q96HD1 420 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
CDH19-202ENST00000454642 IER5Q5VY09 327 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 ZIC5Q96T25 663 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 ACBD3Q9H3P7 528 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 CCSER2Q9H7U1 834 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 CAPN10Q9HC96 672 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 METTL5Q9NRN9 209 aaKnown RBP8.24□□□□□ -1.09
CDH19-202ENST00000454642 TMEM63CQ9P1W3 806 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 DACH1Q9UI36 760 aa8.24□□□□□ -1.09
CDH19-202ENST00000454642 AXIN1O15169 862 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
CDH19-202ENST00000454642 LCE2AQ5TA79 106 aaPredicted RBP8.23□□□□□ -1.09
CDH19-202ENST00000454642 OSBPL7Q9BZF2 842 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
CDH19-202ENST00000454642 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
CDH19-202ENST00000454642 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 PHACTR2O75167 634 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 MSX1P28360 303 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 TNNI2P48788 182 aa8.22□□□□□ -1.09
CDH19-202ENST00000454642 SF3A1Q15459 793 aaKnown RBP8.22□□□□□ -1.09
CDH19-202ENST00000454642 SNX29Q8TEQ0 813 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms