RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
DDR1-240ENST00000454612 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 ZSCAN30Q86W11 494 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 HDAC5Q9UQL6 1122 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 CHD2O14647 1828 aaKnown RBP13.29□□□□□ -0.28
DDR1-240ENST00000454612 CPLX1O14810 134 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 STX6O43752 255 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
DDR1-240ENST00000454612 MCM2P49736 904 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 TIMM10P62072 90 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 SLFNL1Q499Z3 407 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 TSC1Q92574 1164 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
DDR1-240ENST00000454612 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 PTH1RQ03431 593 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 NMIQ13287 307 aaPredicted RBP13.28□□□□□ -0.28
DDR1-240ENST00000454612 USP6P35125 1406 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
DDR1-240ENST00000454612 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.28
DDR1-240ENST00000454612 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.28
DDR1-240ENST00000454612 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.28
DDR1-240ENST00000454612 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
DDR1-240ENST00000454612 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
DDR1-240ENST00000454612 GPT2Q8TD30 523 aa13.27□□□□□ -0.29
DDR1-240ENST00000454612 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
DDR1-240ENST00000454612 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.29
DDR1-240ENST00000454612 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
DDR1-240ENST00000454612 SEC62Q99442 399 aaKnown RBP13.27□□□□□ -0.29
DDR1-240ENST00000454612 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
DDR1-240ENST00000454612 CHGBP05060 677 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 CBX1P83916 185 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 IL25Q9H293 177 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 ERCC4Q92889 916 aaPredicted RBP13.26□□□□□ -0.29
DDR1-240ENST00000454612 TLR7Q9NYK1 1049 aaKnown RBP13.26□□□□□ -0.29
DDR1-240ENST00000454612 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 GRM8O00222 908 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 SYT1P21579 422 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 SLAIN2Q9P270 581 aa13.26□□□□□ -0.29
DDR1-240ENST00000454612 DDIT3P35638 169 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 BRF1Q92994 677 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 ME1P48163 572 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
DDR1-240ENST00000454612 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 SNX14Q9Y5W7 946 aa13.25□□□□□ -0.29
DDR1-240ENST00000454612 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 TNMDQ9H2S6 317 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 A0A087WWV3 80 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 IDH1O75874 414 aaKnown RBP13.24□□□□□ -0.29
DDR1-240ENST00000454612 PSMA5P28066 241 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 IQSEC3Q9UPP2 1182 aaPredicted RBP13.24□□□□□ -0.29
DDR1-240ENST00000454612 VGLL3A8MV65 326 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 TFCP2Q12800 502 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
DDR1-240ENST00000454612 KSR2Q6VAB6 950 aa13.24□□□□□ -0.29
DDR1-240ENST00000454612 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 ADCY5O95622 1261 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 KRT85P78386 507 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 CSPP1Q1MSJ5 1256 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 SLC4A8Q2Y0W8 1093 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 CGNQ9P2M7 1197 aaKnown RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 BIN1O00499 593 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 A1BGP04217 495 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 IP6K1Q92551 441 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
DDR1-240ENST00000454612 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 RGS12O14924 1447 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
DDR1-240ENST00000454612 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 LARGE1O95461 756 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 RXRAP19793 462 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 RALYLQ86SE5 291 aaKnown RBP13.22□□□□□ -0.29
DDR1-240ENST00000454612 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
DDR1-240ENST00000454612 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
DDR1-240ENST00000454612 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
DDR1-240ENST00000454612 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
DDR1-240ENST00000454612 ATP10DQ9P241 1426 aa13.21□□□□□ -0.29
DDR1-240ENST00000454612 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
DDR1-240ENST00000454612 CCDC57Q2TAC2 916 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms