RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 LTN1O94822 1766 aa11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
RFC3P1-201ENST00000454568 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
RFC3P1-201ENST00000454568 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
RFC3P1-201ENST00000454568 LTV1Q96GA3 475 aaPredicted RBP11.88□□□□□ -0.51
RFC3P1-201ENST00000454568 CAMKK2Q96RR4 588 aa11.88□□□□□ -0.51
RFC3P1-201ENST00000454568 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 TERTO14746 1132 aaKnown RBP11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 AMPHP49418 695 aa11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
RFC3P1-201ENST00000454568 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 MARCH10Q8NA82 808 aaPredicted RBP11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 IP6K1Q92551 441 aa11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 ANKRD36BQ8N2N9 1353 aa11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 ABCC6O95255 1503 aa11.86□□□□□ -0.51
RFC3P1-201ENST00000454568 IL2RBP14784 551 aa11.85□□□□□ -0.51
RFC3P1-201ENST00000454568 HPS1Q92902 700 aa11.85□□□□□ -0.51
RFC3P1-201ENST00000454568 GGNBP2Q9H3C7 697 aa11.85□□□□□ -0.51
RFC3P1-201ENST00000454568 WNK3Q9BYP7 1800 aa11.85□□□□□ -0.51
RFC3P1-201ENST00000454568 IRF6O14896 467 aa11.84□□□□□ -0.51
RFC3P1-201ENST00000454568 HOXA2O43364 376 aa11.84□□□□□ -0.51
RFC3P1-201ENST00000454568 FBLN1P23142 703 aa11.84□□□□□ -0.51
RFC3P1-201ENST00000454568 FYB1O15117 783 aa11.83□□□□□ -0.52
RFC3P1-201ENST00000454568 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
RFC3P1-201ENST00000454568 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
RFC3P1-201ENST00000454568 SBF2Q86WG5 1849 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 PLSCR1O15162 318 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 JUNDP17535 347 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 HOXC9P31274 260 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 PEAK1Q9H792 1746 aa11.82□□□□□ -0.52
RFC3P1-201ENST00000454568 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 SKOR1P84550 965 aa11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 PTF1AQ7RTS3 328 aa11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 KAT6BQ8WYB5 2073 aa11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 SRCAPQ6ZRS2 3230 aa11.81□□□□□ -0.52
RFC3P1-201ENST00000454568 TNS2Q63HR2 1409 aa11.8□□□□□ -0.52
RFC3P1-201ENST00000454568 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
RFC3P1-201ENST00000454568 CLCN1P35523 988 aa11.8□□□□□ -0.52
RFC3P1-201ENST00000454568 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
RFC3P1-201ENST00000454568 RREB1Q92766 1687 aa11.8□□□□□ -0.52
RFC3P1-201ENST00000454568 FAM181BA6NEQ2 426 aa11.79□□□□□ -0.52
RFC3P1-201ENST00000454568 KCNQ2O43526 872 aa11.79□□□□□ -0.52
RFC3P1-201ENST00000454568 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
RFC3P1-201ENST00000454568 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
RFC3P1-201ENST00000454568 NUP188Q5SRE5 1749 aa11.79□□□□□ -0.52
RFC3P1-201ENST00000454568 BCL9O00512 1426 aa11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
RFC3P1-201ENST00000454568 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
RFC3P1-201ENST00000454568 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
RFC3P1-201ENST00000454568 HSPA5P11021 654 aaKnown RBP11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 EHBP1Q8NDI1 1231 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 HLA-CQ95604 372 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 WASF2Q9Y6W5 498 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 LRP5O75197 1615 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 RTL1A6NKG5 1358 aa11.77□□□□□ -0.53
RFC3P1-201ENST00000454568 HSP90AB2PQ58FF8 381 aa11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 CGNL1Q0VF96 1302 aa11.76□□□□□ -0.53
RFC3P1-201ENST00000454568 RGPD3A6NKT7 1758 aaPredicted RBP11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 RGPD4Q7Z3J3 1758 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 NBPF6Q5VWK0 638 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 NBPF4Q96M43 638 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 MYOM1P52179 1685 aa11.75□□□□□ -0.53
RFC3P1-201ENST00000454568 TATP17735 454 aaPredicted RBP11.74□□□□□ -0.53
RFC3P1-201ENST00000454568 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
RFC3P1-201ENST00000454568 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
RFC3P1-201ENST00000454568 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
RFC3P1-201ENST00000454568 FLT4P35916 1363 aa11.74□□□□□ -0.53
RFC3P1-201ENST00000454568 INSRP06213 1382 aa11.73□□□□□ -0.53
RFC3P1-201ENST00000454568 TNNT2P45379 298 aaPredicted RBP11.73□□□□□ -0.53
RFC3P1-201ENST00000454568 NHSQ6T4R5 1651 aa11.73□□□□□ -0.53
RFC3P1-201ENST00000454568 KIF24Q5T7B8 1368 aa11.72□□□□□ -0.53
RFC3P1-201ENST00000454568 CAPN5O15484 640 aaPredicted RBP11.72□□□□□ -0.53
RFC3P1-201ENST00000454568 SIAH2O43255 324 aa11.72□□□□□ -0.53
RFC3P1-201ENST00000454568 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
RFC3P1-201ENST00000454568 CCDC102AQ96A19 550 aa11.72□□□□□ -0.53
RFC3P1-201ENST00000454568 PANK3Q9H999 370 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms