RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 SUSD4Q5VX71 490 aa10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 UTP14AQ9BVJ6 771 aaKnown RBP10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.77
AC007879.2-201ENST00000454444 PPEF1O14829 653 aaPredicted RBP10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 HOXA10P31260 410 aaPredicted RBP10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 DEFB115Q30KQ5 88 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 HSP90AB3PQ58FF7 597 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 MAP1SQ66K74 1059 aaPredicted RBP10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 SUPT20HQ8NEM7 779 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 PLEKHF1Q96S99 279 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 SLX4Q8IY92 1834 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 CNTNAP1P78357 1384 aa10.26□□□□□ -0.77
AC007879.2-201ENST00000454444 ANKRD31Q8N7Z5 1873 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 SIPA1L3O60292 1781 aaPredicted RBP10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 PPIP5K2O43314 1243 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 CTCFP49711 727 aaPredicted RBP10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 RALBP1Q15311 655 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 ZNF34Q8IZ26 560 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 PASKQ96RG2 1323 aa10.25□□□□□ -0.77
AC007879.2-201ENST00000454444 FER1L6Q2WGJ9 1857 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 CCDC88AQ3V6T2 1871 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 VEGFBP49765 207 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 AIMP1Q12904 312 aaKnown RBP10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 NEUROD2Q15784 382 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 DDX46Q7L014 1031 aaKnown RBP10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 BABAM1Q9NWV8 329 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 LAS1LQ9Y4W2 734 aaKnown RBP10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 ABCC12Q96J65 1359 aa10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 IBTKQ9P2D0 1353 aaPredicted RBP10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 COL11A2P13942 1736 aaPredicted RBP10.24□□□□□ -0.77
AC007879.2-201ENST00000454444 BBOX1O75936 387 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 NTSR2O95665 410 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 MAP2K1Q02750 393 aaPredicted RBP10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 GRM1Q13255 1194 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 DPP8Q6V1X1 898 aaPredicted RBP10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 USP50Q70EL3 339 aaPredicted RBP10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 VPS33BQ9H267 617 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 TRMT112Q9UI30 125 aaKnown RBP10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
AC007879.2-201ENST00000454444 BCORQ6W2J9 1755 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 FOXN1O15353 648 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 EPS15P42566 896 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 ECE1P42892 770 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 WDR43Q15061 677 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 AOC3Q16853 763 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 SLC10A5Q5PT55 438 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 MPNDQ8N594 471 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 BCL2L13Q9BXK5 485 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 DDX21Q9NR30 783 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
AC007879.2-201ENST00000454444 RASSF10A6NK89 507 aa10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 ANXA1P04083 346 aa10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 HCLS1P14317 486 aaPredicted RBP10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 TNIP1Q15025 636 aa10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 SP8Q8IXZ3 490 aa10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 ADARB2Q9NS39 739 aaKnown RBP10.21□□□□□ -0.77
AC007879.2-201ENST00000454444 WDR33Q9C0J8 1336 aaKnown RBP10.21□□□□□ -0.78
AC007879.2-201ENST00000454444 DICER1Q9UPY3 1922 aaKnown RBP10.21□□□□□ -0.78
AC007879.2-201ENST00000454444 SCN4AP35499 1836 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 SCNN1DP51172 638 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 LBX1P52954 281 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 PROSER3Q2NL68 480 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 RIC1Q4ADV7 1423 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 CIAPIN1Q6FI81 312 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 SH3TC1Q8TE82 1336 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
AC007879.2-201ENST00000454444 ABCC4O15439 1325 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 H7C1D1 291 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 CXCL9Q07325 125 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 PDIA6Q15084 440 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 TMC4Q7Z404 712 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 NLRP10Q86W26 655 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 RUNDC1Q96C34 613 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 GPR101Q96P66 508 aaPredicted RBP10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
AC007879.2-201ENST00000454444 G3V3G9 751 aa10.18□□□□□ -0.78
AC007879.2-201ENST00000454444 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
AC007879.2-201ENST00000454444 GMPSP49915 693 aaPredicted RBP10.18□□□□□ -0.78
AC007879.2-201ENST00000454444 DDX10Q13206 875 aaKnown RBP10.18□□□□□ -0.78
AC007879.2-201ENST00000454444 GRAPQ13588 217 aa10.18□□□□□ -0.78
AC007879.2-201ENST00000454444 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms