RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TSKSQ9UJT2 592 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ABT1Q9ULW3 272 aaKnown RBP7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 RRP7AQ9Y3A4 280 aaKnown RBP7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 DUOX1Q9NRD9 1551 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TMEM88BA6NKF7 163 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 LBX1P52954 281 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PROSER3Q2NL68 480 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 SYNE4Q8N205 404 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PDZRN3Q9UPQ7 1066 aa7.98□□□□□ -1.13
HLA-DPA3-207ENST00000454398 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 FZD9O00144 591 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 EPS15P42566 896 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 SCNN1DP51172 638 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 AOC3Q16853 763 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 CRY2Q49AN0 593 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 CLEC4GQ6UXB4 293 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 DLK2Q6UY11 383 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TPTE2Q6XPS3 522 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 KIF6Q6ZMV9 814 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 CNTROBQ8N137 903 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 NUDCQ9Y266 331 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TRPM7Q96QT4 1865 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 MAP3K15Q6ZN16 1313 aa7.97□□□□□ -1.13
HLA-DPA3-207ENST00000454398 DDX60Q8IY21 1712 aaKnown RBP7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 NTSR2O95665 410 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PDIA6Q15084 440 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 SUSD4Q5VX71 490 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RTKN2Q8IZC4 609 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 LARGE2Q8N3Y3 721 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PLEKHF1Q96S99 279 aa7.96□□□□□ -1.14
HLA-DPA3-207ENST00000454398 LRRC37AA6NMS7 1700 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PPIP5K2O43314 1243 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CTCFP49711 727 aaPredicted RBP7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 EIF4A1P60842 406 aaKnown RBP7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 TAF7Q15545 349 aaPredicted RBP7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 KRT24Q2M2I5 525 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CYP4F22Q6NT55 531 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GPC2Q8N158 579 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 WBP1LQ9NX94 342 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ABCC4O15439 1325 aa7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 IBTKQ9P2D0 1353 aaPredicted RBP7.95□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RASSF10A6NK89 507 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 AOC2O75106 756 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 EIF2S2P20042 333 aaKnown RBP7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 LMOD1P29536 600 aaPredicted RBP7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 EIF6P56537 245 aaKnown RBP7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 FAM161AQ3B820 660 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CST9Q5W186 159 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 NIM1KQ8IY84 436 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 TRPM4Q8TD43 1214 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 JDP2Q8WYK2 163 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CAPNS2Q96L46 248 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ZIC5Q96T25 663 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PSMD1Q99460 953 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ZNF408Q9H9D4 720 aa7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 DDX21Q9NR30 783 aaKnown RBP eCLIP7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 WDR33Q9C0J8 1336 aaKnown RBP7.94□□□□□ -1.14
HLA-DPA3-207ENST00000454398 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ALDH1B1P30837 517 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 HOXA10P31260 410 aaPredicted RBP7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GMPSP49915 693 aaPredicted RBP7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 NFE2L2Q16236 605 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ZNF34Q8IZ26 560 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ABHD8Q96I13 439 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GPR101Q96P66 508 aaPredicted RBP7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GLIS2Q9BZE0 524 aaPredicted RBP7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 NYXQ9GZU5 481 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 TSPYL4Q9UJ04 414 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 MAPK8IP3Q9UPT6 1336 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CASP8AP2Q9UKL3 1982 aa7.93□□□□□ -1.14
HLA-DPA3-207ENST00000454398 SCN9AQ15858 1988 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RAD17O75943 681 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 HIRAP54198 1017 aaPredicted RBP7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 AIMP1Q12904 312 aaKnown RBP7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 DEFB115Q30KQ5 88 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PNMA8AQ86V59 439 aaPredicted RBP7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CCDC146Q8IYE0 955 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PRDM10Q9NQV6 1147 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 PDE4DIPQ5VU43 2346 aa7.92□□□□□ -1.14
HLA-DPA3-207ENST00000454398 YDJCA8MPS7 323 aa7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 HTATSF1O43719 755 aaKnown RBP7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CELF2O95319 508 aaKnown RBP7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 EGFRP00533 1210 aa7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RTL5Q5HYW3 569 aaPredicted RBP7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GIGYF2Q6Y7W6 1299 aaKnown RBP7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 XAGE3Q8WTP9 111 aa7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RBM17Q96I25 401 aaKnown RBP7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 GPRC5DQ9NZD1 345 aa7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 SPEF2Q9C093 1822 aa7.91□□□□□ -1.14
HLA-DPA3-207ENST00000454398 RGL2O15211 777 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 NEFMP07197 916 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CXCL9Q07325 125 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 DPP8Q6V1X1 898 aaPredicted RBP7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CFAP44Q96MT7 982 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms