RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 DDX58O95786 925 aaKnown RBP7.55□□□□□ -1.2
MSH6-205ENST00000454137 GNAI3P08754 354 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 SLC39A6Q13433 755 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
MSH6-205ENST00000454137 KSR2Q6VAB6 950 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 G2E3Q7L622 706 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 LRP10Q7Z4F1 713 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 RPAP2Q8IXW5 612 aaPredicted RBP7.55□□□□□ -1.2
MSH6-205ENST00000454137 SLC39A7Q92504 469 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 C8orf37Q96NL8 207 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 CHPF2Q9P2E5 772 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 TRPC5Q9UL62 973 aaPredicted RBP7.55□□□□□ -1.2
MSH6-205ENST00000454137 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
MSH6-205ENST00000454137 NHSQ6T4R5 1651 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 GABBR2O75899 941 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 EIF2S2P20042 333 aaKnown RBP7.54□□□□□ -1.2
MSH6-205ENST00000454137 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
MSH6-205ENST00000454137 SMC5Q8IY18 1101 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 MARCH10Q8NA82 808 aaPredicted RBP7.54□□□□□ -1.2
MSH6-205ENST00000454137 PIGBQ92521 554 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 SMARCC1Q92922 1105 aaPredicted RBP7.54□□□□□ -1.2
MSH6-205ENST00000454137 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
MSH6-205ENST00000454137 TJP1Q07157 1748 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 NUP188Q5SRE5 1749 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 ARFGEF2Q9Y6D5 1785 aa7.54□□□□□ -1.2
MSH6-205ENST00000454137 C7P10643 843 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 PTGER2P43116 358 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 BEND3Q5T5X7 828 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 MEX3CQ5U5Q3 659 aaKnown RBP7.53□□□□□ -1.2
MSH6-205ENST00000454137 OXER1Q8TDS5 423 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 DNAAF4Q8WXU2 420 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 GCC1Q96CN9 775 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 ADCY9O60503 1353 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 COL15A1P39059 1388 aa7.53□□□□□ -1.2
MSH6-205ENST00000454137 UTYO14607 1347 aa7.52□□□□□ -1.2
MSH6-205ENST00000454137 AFF2P51816 1311 aa7.52□□□□□ -1.2
MSH6-205ENST00000454137 COL5A3P25940 1745 aaPredicted RBP7.52□□□□□ -1.2
MSH6-205ENST00000454137 PI4KAP2A4QPH2 592 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 GRXCR2A6NFK2 248 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 STARD3NLO95772 234 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 ANKRD44Q8N8A2 993 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 PI4KAP1Q8N8J0 262 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 LINS1Q8NG48 757 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 SRCIN1Q9C0H9 1055 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
MSH6-205ENST00000454137 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
MSH6-205ENST00000454137 LY75O60449 1722 aa7.52□□□□□ -1.21
MSH6-205ENST00000454137 AFDNP55196 1824 aaKnown RBP7.51□□□□□ -1.21
MSH6-205ENST00000454137 PRAMEF22A3QJZ6 481 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 GNAI2P04899 355 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
MSH6-205ENST00000454137 RGS3P49796 1198 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
MSH6-205ENST00000454137 ZNF772Q68DY9 489 aaPredicted RBP7.51□□□□□ -1.21
MSH6-205ENST00000454137 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 PLBD2Q8NHP8 589 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 METTL22Q9BUU2 404 aaPredicted RBP7.51□□□□□ -1.21
MSH6-205ENST00000454137 USP44Q9H0E7 712 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 DCTPP1Q9H773 170 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 C1orf115Q9H7X2 142 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 ANKRD36CQ5JPF3 1778 aa7.51□□□□□ -1.21
MSH6-205ENST00000454137 BTAF1O14981 1849 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 F6X3S4 739 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 HMMRO75330 724 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
MSH6-205ENST00000454137 MTX1Q13505 466 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 PROSER3Q2NL68 480 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 CEP85Q6P2H3 762 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
MSH6-205ENST00000454137 ASAP1Q9ULH1 1129 aa7.5□□□□□ -1.21
MSH6-205ENST00000454137 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 TRIM66O15016 1216 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
MSH6-205ENST00000454137 IL6STP40189 918 aaPredicted RBP7.49□□□□□ -1.21
MSH6-205ENST00000454137 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 NUCB1Q02818 461 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
MSH6-205ENST00000454137 SLC4A10Q6U841 1118 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 C3orf67Q6ZVT6 689 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 COPS6Q7L5N1 327 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 XAGE3Q8WTP9 111 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 MEIS3Q99687 375 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 QTRT2Q9H974 415 aaKnown RBP7.49□□□□□ -1.21
MSH6-205ENST00000454137 MAP3K2Q9Y2U5 619 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 NUP98P52948 1817 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 BRWD3Q6RI45 1802 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 TAF1LQ8IZX4 1826 aa7.49□□□□□ -1.21
MSH6-205ENST00000454137 ERVV-1B6SEH8 477 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 PTCD1O75127 700 aaKnown RBP7.48□□□□□ -1.21
MSH6-205ENST00000454137 ANXA1P04083 346 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 UBTFL1P0CB47 393 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms