RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 SUSD4Q5VX71 490 aa22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 C7orf43Q8WVR3 580 aa22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 RBM17Q96I25 401 aaKnown RBP22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 NLRP3Q96P20 1036 aa22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 UTP14AQ9BVJ6 771 aaKnown RBP22.17■■□□□ 1.14
TNFRSF4-202ENST00000453580 ANP32CO43423 234 aa22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 HOXA10P31260 410 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 XAGE3Q8WTP9 111 aa22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 HYPKQ9NX55 129 aa22.16■■□□□ 1.14
TNFRSF4-202ENST00000453580 NTSR2O95665 410 aa22.15■■□□□ 1.14
TNFRSF4-202ENST00000453580 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
TNFRSF4-202ENST00000453580 DUSP27Q5VZP5 1158 aa22.15■■□□□ 1.14
TNFRSF4-202ENST00000453580 NECTIN2Q92692 538 aa22.15■■□□□ 1.14
TNFRSF4-202ENST00000453580 CRAMP1Q96RY5 1269 aa22.15■■□□□ 1.14
TNFRSF4-202ENST00000453580 PRELPP51888 382 aa22.14■■□□□ 1.13
TNFRSF4-202ENST00000453580 TCIRG1Q13488 830 aa22.14■■□□□ 1.13
TNFRSF4-202ENST00000453580 SLC10A5Q5PT55 438 aa22.14■■□□□ 1.13
TNFRSF4-202ENST00000453580 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
TNFRSF4-202ENST00000453580 MBIPQ9NS73 344 aa22.14■■□□□ 1.13
TNFRSF4-202ENST00000453580 ABCC12Q96J65 1359 aa22.13■■□□□ 1.13
TNFRSF4-202ENST00000453580 ANXA1P04083 346 aa22.13■■□□□ 1.13
TNFRSF4-202ENST00000453580 ZNF853P0CG23 659 aa22.13■■□□□ 1.13
TNFRSF4-202ENST00000453580 PLBD2Q8NHP8 589 aa22.13■■□□□ 1.13
TNFRSF4-202ENST00000453580 CHPF2Q9P2E5 772 aa22.13■■□□□ 1.13
TNFRSF4-202ENST00000453580 WDR90Q96KV7 1748 aa22.12■■□□□ 1.13
TNFRSF4-202ENST00000453580 ANKRD13DQ6ZTN6 518 aa22.12■■□□□ 1.13
TNFRSF4-202ENST00000453580 PSMD1Q99460 953 aa22.12■■□□□ 1.13
TNFRSF4-202ENST00000453580 KRT24Q2M2I5 525 aa22.11■■□□□ 1.13
TNFRSF4-202ENST00000453580 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
TNFRSF4-202ENST00000453580 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
TNFRSF4-202ENST00000453580 NLRP10Q86W26 655 aa22.1■■□□□ 1.13
TNFRSF4-202ENST00000453580 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
TNFRSF4-202ENST00000453580 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
TNFRSF4-202ENST00000453580 IQCA1LA6NCM1 817 aa22.09■■□□□ 1.13
TNFRSF4-202ENST00000453580 JDP2Q8WYK2 163 aa22.09■■□□□ 1.13
TNFRSF4-202ENST00000453580 HSP90B1P14625 803 aaKnown RBP22.08■■□□□ 1.13
TNFRSF4-202ENST00000453580 IARSP41252 1262 aaKnown RBP22.08■■□□□ 1.13
TNFRSF4-202ENST00000453580 MRS2Q9HD23 443 aa22.08■■□□□ 1.13
TNFRSF4-202ENST00000453580 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF4-202ENST00000453580 GOLGA2Q08379 1002 aa22.07■■□□□ 1.12
TNFRSF4-202ENST00000453580 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
TNFRSF4-202ENST00000453580 BBOX1O75936 387 aa22.06■■□□□ 1.12
TNFRSF4-202ENST00000453580 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
TNFRSF4-202ENST00000453580 VPS33BQ9H267 617 aa22.06■■□□□ 1.12
TNFRSF4-202ENST00000453580 ZNF277Q9NRM2 450 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF4-202ENST00000453580 SCN4AP35499 1836 aa22.06■■□□□ 1.12
TNFRSF4-202ENST00000453580 DDX58O95786 925 aaKnown RBP22.05■■□□□ 1.12
TNFRSF4-202ENST00000453580 DDX46Q7L014 1031 aaKnown RBP22.05■■□□□ 1.12
TNFRSF4-202ENST00000453580 TMC4Q7Z404 712 aa22.05■■□□□ 1.12
TNFRSF4-202ENST00000453580 SUPT20HQ8NEM7 779 aa22.05■■□□□ 1.12
TNFRSF4-202ENST00000453580 TRIM28Q13263 835 aaKnown RBP22.04■■□□□ 1.12
TNFRSF4-202ENST00000453580 RIC3Q7Z5B4 369 aa22.04■■□□□ 1.12
TNFRSF4-202ENST00000453580 L3MBTL3Q96JM7 780 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF4-202ENST00000453580 DDNO94850 711 aaPredicted RBP22.03■■□□□ 1.12
TNFRSF4-202ENST00000453580 ISCA1Q9BUE6 129 aa22.03■■□□□ 1.12
TNFRSF4-202ENST00000453580 ATP6V0A2Q9Y487 856 aa22.03■■□□□ 1.12
TNFRSF4-202ENST00000453580 IL16Q14005 1332 aa22.03■■□□□ 1.12
TNFRSF4-202ENST00000453580 EIF6P56537 245 aaKnown RBP22.02■■□□□ 1.12
TNFRSF4-202ENST00000453580 LAMB2P55268 1798 aa22.02■■□□□ 1.11
TNFRSF4-202ENST00000453580 FZD9O00144 591 aa22.01■■□□□ 1.11
TNFRSF4-202ENST00000453580 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF4-202ENST00000453580 OLFM4Q6UX06 510 aa22.01■■□□□ 1.11
TNFRSF4-202ENST00000453580 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
TNFRSF4-202ENST00000453580 STK31Q9BXU1 1019 aa22.01■■□□□ 1.11
TNFRSF4-202ENST00000453580 SNED1Q8TER0 1413 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 POTECB2RU33 542 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
TNFRSF4-202ENST00000453580 CCDC184Q52MB2 194 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 SP8Q8IXZ3 490 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 GPC2Q8N158 579 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 ABCC4O15439 1325 aa22■■□□□ 1.11
TNFRSF4-202ENST00000453580 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
TNFRSF4-202ENST00000453580 LARGE2Q8N3Y3 721 aa21.99■■□□□ 1.11
TNFRSF4-202ENST00000453580 C8orf58Q8NAV2 365 aa21.99■■□□□ 1.11
TNFRSF4-202ENST00000453580 GRAPQ13588 217 aa21.98■■□□□ 1.11
TNFRSF4-202ENST00000453580 CHADLQ6NUI6 762 aa21.98■■□□□ 1.11
TNFRSF4-202ENST00000453580 PNMA8AQ86V59 439 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF4-202ENST00000453580 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF4-202ENST00000453580 HACL1Q9UJ83 578 aa21.98■■□□□ 1.11
TNFRSF4-202ENST00000453580 ATP5J2-PTCD1G3V325 749 aa21.97■■□□□ 1.11
TNFRSF4-202ENST00000453580 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
TNFRSF4-202ENST00000453580 SF3B3Q15393 1217 aaKnown RBP21.97■■□□□ 1.11
TNFRSF4-202ENST00000453580 NIM1KQ8IY84 436 aa21.97■■□□□ 1.11
TNFRSF4-202ENST00000453580 CCDC191Q8NCU4 936 aa21.97■■□□□ 1.11
TNFRSF4-202ENST00000453580 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 LDHDQ86WU2 507 aa21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 WDR63Q8IWG1 891 aa21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 MPNDQ8N594 471 aa21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 ZBTB38Q8NAP3 1195 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 PHAXQ9H814 394 aaKnown RBP21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 CACNA1FO60840 1977 aa21.96■■□□□ 1.11
TNFRSF4-202ENST00000453580 DDX60Q8IY21 1712 aaKnown RBP21.95■■□□□ 1.1
TNFRSF4-202ENST00000453580 PPIP5K2O43314 1243 aa21.95■■□□□ 1.1
TNFRSF4-202ENST00000453580 LMOD1P29536 600 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF4-202ENST00000453580 RTFDC1Q9BY42 306 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF4-202ENST00000453580 TAF1DQ9H5J8 278 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms