RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 ZNF277Q9NRM2 450 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-207ENST00000453536 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
RFTN1-207ENST00000453536 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
RFTN1-207ENST00000453536 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
RFTN1-207ENST00000453536 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
RFTN1-207ENST00000453536 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
RFTN1-207ENST00000453536 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
RFTN1-207ENST00000453536 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
RFTN1-207ENST00000453536 RGL2O15211 777 aa18.35■□□□□ 0.53
RFTN1-207ENST00000453536 HSPA6P17066 643 aa18.35■□□□□ 0.53
RFTN1-207ENST00000453536 NLRP10Q86W26 655 aa18.35■□□□□ 0.53
RFTN1-207ENST00000453536 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
RFTN1-207ENST00000453536 RIC1Q4ADV7 1423 aa18.34■□□□□ 0.53
RFTN1-207ENST00000453536 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
RFTN1-207ENST00000453536 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
RFTN1-207ENST00000453536 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
RFTN1-207ENST00000453536 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
RFTN1-207ENST00000453536 GLTPD2A6NH11 291 aa18.33■□□□□ 0.52
RFTN1-207ENST00000453536 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
RFTN1-207ENST00000453536 NYXQ9GZU5 481 aa18.33■□□□□ 0.52
RFTN1-207ENST00000453536 IFT57Q9NWB7 429 aa18.33■□□□□ 0.52
RFTN1-207ENST00000453536 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
RFTN1-207ENST00000453536 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
RFTN1-207ENST00000453536 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
RFTN1-207ENST00000453536 TOMM70O94826 608 aa18.32■□□□□ 0.52
RFTN1-207ENST00000453536 CCDC93Q567U6 631 aa18.32■□□□□ 0.52
RFTN1-207ENST00000453536 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
RFTN1-207ENST00000453536 UTP14AQ9BVJ6 771 aaKnown RBP18.32■□□□□ 0.52
RFTN1-207ENST00000453536 LTBP1Q14766 1721 aa18.32■□□□□ 0.52
RFTN1-207ENST00000453536 TCIRG1Q13488 830 aa18.31■□□□□ 0.52
RFTN1-207ENST00000453536 RPGRQ92834 1020 aaKnown RBP18.31■□□□□ 0.52
RFTN1-207ENST00000453536 ABCC4O15439 1325 aa18.3■□□□□ 0.52
RFTN1-207ENST00000453536 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
RFTN1-207ENST00000453536 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
RFTN1-207ENST00000453536 ANP32CO43423 234 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 GNAI1P63096 354 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 FAM89AQ96GI7 184 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
RFTN1-207ENST00000453536 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
RFTN1-207ENST00000453536 DUOX1Q9NRD9 1551 aa18.29■□□□□ 0.52
RFTN1-207ENST00000453536 PPEF1O14829 653 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-207ENST00000453536 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-207ENST00000453536 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
RFTN1-207ENST00000453536 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
RFTN1-207ENST00000453536 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
RFTN1-207ENST00000453536 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
RFTN1-207ENST00000453536 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.52
RFTN1-207ENST00000453536 HOXB7P09629 217 aa18.27■□□□□ 0.52
RFTN1-207ENST00000453536 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
RFTN1-207ENST00000453536 G2E3Q7L622 706 aa18.27■□□□□ 0.52
RFTN1-207ENST00000453536 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
RFTN1-207ENST00000453536 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.52
RFTN1-207ENST00000453536 PCNTO95613 3336 aa18.26■□□□□ 0.51
RFTN1-207ENST00000453536 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
RFTN1-207ENST00000453536 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
RFTN1-207ENST00000453536 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
RFTN1-207ENST00000453536 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
RFTN1-207ENST00000453536 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
RFTN1-207ENST00000453536 NLRP3Q96P20 1036 aa18.25■□□□□ 0.51
RFTN1-207ENST00000453536 MYD88Q99836 296 aa18.25■□□□□ 0.51
RFTN1-207ENST00000453536 SH3TC1Q8TE82 1336 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 SCN4AP35499 1836 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-207ENST00000453536 SOGA3Q5TF21 947 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 ADAMTSL1Q8N6G6 1762 aa18.24■□□□□ 0.51
RFTN1-207ENST00000453536 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
RFTN1-207ENST00000453536 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
RFTN1-207ENST00000453536 RIC3Q7Z5B4 369 aa18.23■□□□□ 0.51
RFTN1-207ENST00000453536 CELF1Q92879 486 aaKnown RBP18.23■□□□□ 0.51
RFTN1-207ENST00000453536 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
RFTN1-207ENST00000453536 AOC3Q16853 763 aa18.22■□□□□ 0.51
RFTN1-207ENST00000453536 RTKN2Q8IZC4 609 aa18.22■□□□□ 0.51
RFTN1-207ENST00000453536 GPR101Q96P66 508 aaPredicted RBP18.22■□□□□ 0.51
RFTN1-207ENST00000453536 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
RFTN1-207ENST00000453536 MYH3P11055 1940 aa18.21■□□□□ 0.51
RFTN1-207ENST00000453536 DNAJC5GQ8N7S2 189 aa18.21■□□□□ 0.51
RFTN1-207ENST00000453536 FZD9O00144 591 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
RFTN1-207ENST00000453536 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 PSMD1Q99460 953 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 MAP3K2Q9Y2U5 619 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 ATP6V0A2Q9Y487 856 aa18.2■□□□□ 0.5
RFTN1-207ENST00000453536 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
RFTN1-207ENST00000453536 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
RFTN1-207ENST00000453536 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
RFTN1-207ENST00000453536 GJA3Q9Y6H8 435 aa18.19■□□□□ 0.5
RFTN1-207ENST00000453536 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
RFTN1-207ENST00000453536 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-207ENST00000453536 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
RFTN1-207ENST00000453536 APLP1P51693 650 aa18.18■□□□□ 0.5
RFTN1-207ENST00000453536 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
RFTN1-207ENST00000453536 GRAPQ13588 217 aa18.18■□□□□ 0.5
RFTN1-207ENST00000453536 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms