RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CWC25Q9NXE8 425 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 AFDNP55196 1824 aaKnown RBP18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-207ENST00000453349 NRXN2Q9P2S2 1712 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 NUTM1Q86Y26 1132 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 LINS1Q8NG48 757 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
NCKIPSD-207ENST00000453349 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
NCKIPSD-207ENST00000453349 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
NCKIPSD-207ENST00000453349 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
NCKIPSD-207ENST00000453349 C10orf71Q711Q0 1435 aa18.53■□□□□ 0.56
NCKIPSD-207ENST00000453349 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
NCKIPSD-207ENST00000453349 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
NCKIPSD-207ENST00000453349 H0YIN7 160 aa18.52■□□□□ 0.56
NCKIPSD-207ENST00000453349 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
NCKIPSD-207ENST00000453349 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
NCKIPSD-207ENST00000453349 SRCIN1Q9C0H9 1055 aa18.52■□□□□ 0.56
NCKIPSD-207ENST00000453349 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 FAM89AQ96GI7 184 aa18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 NLRP3Q96P20 1036 aa18.51■□□□□ 0.55
NCKIPSD-207ENST00000453349 ALDH1L1O75891 902 aa18.5■□□□□ 0.55
NCKIPSD-207ENST00000453349 GCKRQ14397 625 aa18.5■□□□□ 0.55
NCKIPSD-207ENST00000453349 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-207ENST00000453349 ZKSCAN2Q63HK3 967 aa18.5■□□□□ 0.55
NCKIPSD-207ENST00000453349 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
NCKIPSD-207ENST00000453349 DPEP1P16444 411 aa18.49■□□□□ 0.55
NCKIPSD-207ENST00000453349 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
NCKIPSD-207ENST00000453349 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
NCKIPSD-207ENST00000453349 H7C1W4 665 aa18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 CHRNA5P30532 468 aa18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 CCT4P50991 539 aaKnown RBP18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 SYNE4Q8N205 404 aa18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 C9orf78Q9NZ63 289 aaPredicted RBP18.48■□□□□ 0.55
NCKIPSD-207ENST00000453349 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
NCKIPSD-207ENST00000453349 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-207ENST00000453349 JARID2Q92833 1246 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-207ENST00000453349 ZNF622Q969S3 477 aaKnown RBP eCLIP18.47■□□□□ 0.558e-7■□□□□ 8.8
NCKIPSD-207ENST00000453349 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
NCKIPSD-207ENST00000453349 KLRG2A4D1S0 409 aaPredicted RBP18.46■□□□□ 0.55
NCKIPSD-207ENST00000453349 KCNA3P22001 575 aa18.46■□□□□ 0.55
NCKIPSD-207ENST00000453349 MASTLQ96GX5 879 aa18.46■□□□□ 0.55
NCKIPSD-207ENST00000453349 CDHR2Q9BYE9 1310 aa18.46■□□□□ 0.55
NCKIPSD-207ENST00000453349 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.54
NCKIPSD-207ENST00000453349 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 PDE8AO60658 829 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 SRGNP10124 158 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 MS4A1P11836 297 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 TRIM27P14373 513 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 NPR1P16066 1061 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 RIC1Q4ADV7 1423 aa18.45■□□□□ 0.54
NCKIPSD-207ENST00000453349 GRM8O00222 908 aa18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 STYK1Q6J9G0 422 aa18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 N4BP2Q86UW6 1770 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-207ENST00000453349 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 GPR162Q16538 588 aa18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 INTS3Q68E01 1043 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 FTSJ3Q8IY81 847 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 DZIP1LQ8IYY4 767 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 TTLL6Q8N841 843 aa18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 CNKSR1Q969H4 720 aa18.43■□□□□ 0.54
NCKIPSD-207ENST00000453349 CRY2Q49AN0 593 aa18.42■□□□□ 0.54
NCKIPSD-207ENST00000453349 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-207ENST00000453349 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
NCKIPSD-207ENST00000453349 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
NCKIPSD-207ENST00000453349 ABCC4O15439 1325 aa18.42■□□□□ 0.54
NCKIPSD-207ENST00000453349 CASP7P55210 303 aa18.41■□□□□ 0.54
NCKIPSD-207ENST00000453349 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-207ENST00000453349 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-207ENST00000453349 HDAC5Q9UQL6 1122 aa18.41■□□□□ 0.54
NCKIPSD-207ENST00000453349 TNNQ9UQP3 1299 aa18.41■□□□□ 0.54
NCKIPSD-207ENST00000453349 C3orf67Q6ZVT6 689 aa18.4■□□□□ 0.54
NCKIPSD-207ENST00000453349 CRAMP1Q96RY5 1269 aa18.4■□□□□ 0.54
NCKIPSD-207ENST00000453349 USP44Q9H0E7 712 aa18.4■□□□□ 0.54
NCKIPSD-207ENST00000453349 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
NCKIPSD-207ENST00000453349 PLIN1O60240 522 aa18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 NBPF7P0C2Y1 421 aaPredicted RBP18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 HOXA10P31260 410 aaPredicted RBP18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 UTYO14607 1347 aa18.39■□□□□ 0.53
NCKIPSD-207ENST00000453349 DDX60Q8IY21 1712 aaKnown RBP18.38■□□□□ 0.53
NCKIPSD-207ENST00000453349 CTSWP56202 376 aa18.38■□□□□ 0.53
NCKIPSD-207ENST00000453349 TMEM57Q8N5G2 664 aa18.38■□□□□ 0.53
NCKIPSD-207ENST00000453349 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
NCKIPSD-207ENST00000453349 GNAI3P08754 354 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms