RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 RFX5P48382 616 aaPredicted RBP24.48■■□□□ 1.51
PDCD2-204ENST00000453163 SNX14Q9Y5W7 946 aa24.48■■□□□ 1.51
PDCD2-204ENST00000453163 XRCC6P12956 609 aaKnown RBP eCLIP24.48■■□□□ 1.51
PDCD2-204ENST00000453163 RABL6Q3YEC7 729 aaPredicted RBP24.48■■□□□ 1.51
PDCD2-204ENST00000453163 COPRSQ9NQ92 184 aa24.48■■□□□ 1.51
PDCD2-204ENST00000453163 CASP7P55210 303 aa24.48■■□□□ 1.51
PDCD2-204ENST00000453163 PTPN12Q05209 780 aaKnown RBP24.48■■□□□ 1.51
PDCD2-204ENST00000453163 RASEFQ8IZ41 740 aa24.48■■□□□ 1.51
PDCD2-204ENST00000453163 ZDHHC9Q9Y397 364 aa24.48■■□□□ 1.51
PDCD2-204ENST00000453163 COL15A1P39059 1388 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 GOLGA6L3A6NEY3 463 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 GOLGA6L22H0YM25 854 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 PTMSP20962 102 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 CUL4AQ13619 759 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 UBE2Q2Q8WVN8 375 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 RUFY2Q8WXA3 655 aa24.47■■□□□ 1.51
PDCD2-204ENST00000453163 TNS2Q63HR2 1409 aa24.46■■□□□ 1.51
PDCD2-204ENST00000453163 BOLA2Q9H3K6 86 aa24.46■■□□□ 1.51
PDCD2-204ENST00000453163 TJP1Q07157 1748 aa24.46■■□□□ 1.51
PDCD2-204ENST00000453163 PTH1RQ03431 593 aa24.45■■□□□ 1.5
PDCD2-204ENST00000453163 SKOR2Q2VWA4 1001 aaPredicted RBP24.45■■□□□ 1.5
PDCD2-204ENST00000453163 MCTP1Q6DN14 999 aa24.45■■□□□ 1.5
PDCD2-204ENST00000453163 FAM227BQ96M60 508 aa24.43■■□□□ 1.5
PDCD2-204ENST00000453163 ZBTB3Q9H5J0 574 aa24.43■■□□□ 1.5
PDCD2-204ENST00000453163 TFCP2Q12800 502 aa24.43■■□□□ 1.5
PDCD2-204ENST00000453163 LMBR1LQ6UX01 489 aa24.42■■□□□ 1.5
PDCD2-204ENST00000453163 NMIQ13287 307 aaPredicted RBP24.41■■□□□ 1.5
PDCD2-204ENST00000453163 INTS4Q96HW7 963 aaKnown RBP24.41■■□□□ 1.5
PDCD2-204ENST00000453163 BTG4Q9NY30 223 aa24.41■■□□□ 1.5
PDCD2-204ENST00000453163 DBNLQ9UJU6 430 aaKnown RBP24.41■■□□□ 1.5
PDCD2-204ENST00000453163 TNNI3KQ59H18 835 aa24.41■■□□□ 1.5
PDCD2-204ENST00000453163 CWC25Q9NXE8 425 aaPredicted RBP24.41■■□□□ 1.5
PDCD2-204ENST00000453163 TMOD3Q9NYL9 352 aa24.41■■□□□ 1.5
PDCD2-204ENST00000453163 FPGT-TNNI3KV9GXZ4 949 aa24.41■■□□□ 1.5
PDCD2-204ENST00000453163 H7C1W4 665 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 FOXD4L5Q5VV16 416 aaPredicted RBP24.4■■□□□ 1.5
PDCD2-204ENST00000453163 FOXD4L4Q8WXT5 416 aaPredicted RBP24.4■■□□□ 1.5
PDCD2-204ENST00000453163 TTC14Q96N46 770 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 FSD1Q9BTV5 496 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 FOXO4P98177 505 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 CHMP3Q9Y3E7 222 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 CCDC171Q6TFL3 1326 aa24.4■■□□□ 1.5
PDCD2-204ENST00000453163 CHAMP1Q96JM3 812 aa24.39■■□□□ 1.5
PDCD2-204ENST00000453163 PRPF40BQ6NWY9 871 aaKnown RBP24.39■■□□□ 1.49
PDCD2-204ENST00000453163 EDC3Q96F86 508 aaKnown RBP24.39■■□□□ 1.49
PDCD2-204ENST00000453163 CPA1P15085 419 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 DDX49Q9Y6V7 483 aaKnown RBP24.38■■□□□ 1.49
PDCD2-204ENST00000453163 A0A0D9SFI3 127 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 HIP1O00291 1037 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 CASTP20810 708 aaKnown RBP24.38■■□□□ 1.49
PDCD2-204ENST00000453163 AK2P54819 239 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 PANK2Q9BZ23 570 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 ITGB4P16144 1822 aa24.38■■□□□ 1.49
PDCD2-204ENST00000453163 KLHL40Q2TBA0 621 aa24.37■■□□□ 1.49
PDCD2-204ENST00000453163 LMBRD1Q9NUN5 540 aa24.37■■□□□ 1.49
PDCD2-204ENST00000453163 ADCK5Q3MIX3 580 aa24.37■■□□□ 1.49
PDCD2-204ENST00000453163 LARP6Q9BRS8 491 aaKnown RBP24.37■■□□□ 1.49
PDCD2-204ENST00000453163 ASAP1Q9ULH1 1129 aa24.37■■□□□ 1.49
PDCD2-204ENST00000453163 KAT6BQ8WYB5 2073 aa24.36■■□□□ 1.49
PDCD2-204ENST00000453163 ZNF330Q9Y3S2 320 aaPredicted RBP24.36■■□□□ 1.49
PDCD2-204ENST00000453163 NDUFB9Q9Y6M9 179 aa24.36■■□□□ 1.49
PDCD2-204ENST00000453163 BRD1O95696 1058 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 NECTIN1Q15223 517 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 PIGBQ92521 554 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 DBNDD2Q9BQY9 259 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 RBM8AQ9Y5S9 174 aaKnown RBP24.35■■□□□ 1.49
PDCD2-204ENST00000453163 ATP5JP18859 108 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 RUFY3Q7L099 469 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
PDCD2-204ENST00000453163 JAKMIP1Q96N16 626 aaKnown RBP24.35■■□□□ 1.49
PDCD2-204ENST00000453163 MRE11P49959 708 aa24.34■■□□□ 1.49
PDCD2-204ENST00000453163 SNRKQ9NRH2 765 aa24.34■■□□□ 1.49
PDCD2-204ENST00000453163 GAS2L3Q86XJ1 694 aa24.34■■□□□ 1.49
PDCD2-204ENST00000453163 KCNB2Q92953 911 aa24.34■■□□□ 1.49
PDCD2-204ENST00000453163 MED23Q9ULK4 1368 aa24.33■■□□□ 1.49
PDCD2-204ENST00000453163 MAP4K1Q92918 833 aa24.33■■□□□ 1.49
PDCD2-204ENST00000453163 COL14A1Q05707 1796 aaKnown RBP24.33■■□□□ 1.49
PDCD2-204ENST00000453163 DNAJC10Q8IXB1 793 aa24.33■■□□□ 1.48
PDCD2-204ENST00000453163 ROBO1Q9Y6N7 1651 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 CLCN1P35523 988 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 KCNJ4P48050 445 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 ATG9AQ7Z3C6 839 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 ZNF589Q86UQ0 364 aaPredicted RBP24.32■■□□□ 1.48
PDCD2-204ENST00000453163 GRPEL1Q9HAV7 217 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 PRPF40AO75400 957 aaKnown RBP24.32■■□□□ 1.48
PDCD2-204ENST00000453163 CREB3L3Q68CJ9 461 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 LIMCH1Q9UPQ0 1083 aa24.32■■□□□ 1.48
PDCD2-204ENST00000453163 DISP2A7MBM2 1401 aa24.31■■□□□ 1.48
PDCD2-204ENST00000453163 ATG3Q9NT62 314 aa24.31■■□□□ 1.48
PDCD2-204ENST00000453163 CCDC9Q9Y3X0 531 aaKnown RBP24.31■■□□□ 1.48
PDCD2-204ENST00000453163 DNAJC2Q99543 621 aaKnown RBP24.3■■□□□ 1.48
PDCD2-204ENST00000453163 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
PDCD2-204ENST00000453163 ISY1Q9ULR0 285 aaKnown RBP24.3■■□□□ 1.48
PDCD2-204ENST00000453163 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.3■■□□□ 1.48
PDCD2-204ENST00000453163 ZKSCAN1P17029 563 aaPredicted RBP24.3■■□□□ 1.48
PDCD2-204ENST00000453163 ZNF594Q96JF6 807 aaPredicted RBP24.3■■□□□ 1.48
PDCD2-204ENST00000453163 TM6SF1Q9BZW5 370 aa24.3■■□□□ 1.48
PDCD2-204ENST00000453163 LARGE1O95461 756 aa24.29■■□□□ 1.48
PDCD2-204ENST00000453163 ISCA1Q9BUE6 129 aa24.29■■□□□ 1.48
PDCD2-204ENST00000453163 PDRG1Q9NUG6 133 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms