RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 PHAXQ9H814 394 aaKnown RBP16■□□□□ 0.15
CSNK1E-211ENST00000451964 HSP90AB3PQ58FF7 597 aa15.99■□□□□ 0.15
CSNK1E-211ENST00000451964 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
CSNK1E-211ENST00000451964 NMRK2Q9NPI5 230 aa15.99■□□□□ 0.15
CSNK1E-211ENST00000451964 IL16Q14005 1332 aa15.98■□□□□ 0.15
CSNK1E-211ENST00000451964 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-211ENST00000451964 NUP98P52948 1817 aa15.98■□□□□ 0.15
CSNK1E-211ENST00000451964 SLX4Q8IY92 1834 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 ALDH1B1P30837 517 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 ISCA1Q9BUE6 129 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 TAOK3Q9H2K8 898 aa15.97■□□□□ 0.15
CSNK1E-211ENST00000451964 LTBP3Q9NS15 1303 aa15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 TRMT112Q9UI30 125 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-211ENST00000451964 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-211ENST00000451964 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
CSNK1E-211ENST00000451964 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
CSNK1E-211ENST00000451964 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-211ENST00000451964 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
CSNK1E-211ENST00000451964 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 TRIM28Q13263 835 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 TWISTNBQ3B726 338 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 SH3TC1Q8TE82 1336 aa15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
CSNK1E-211ENST00000451964 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
CSNK1E-211ENST00000451964 RIC3Q7Z5B4 369 aa15.93■□□□□ 0.14
CSNK1E-211ENST00000451964 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
CSNK1E-211ENST00000451964 RRAGCQ9HB90 399 aa15.93■□□□□ 0.14
CSNK1E-211ENST00000451964 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
CSNK1E-211ENST00000451964 GLTPD2A6NH11 291 aa15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 SBF1O95248 1867 aa15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 SNED1Q8TER0 1413 aa15.92■□□□□ 0.14
CSNK1E-211ENST00000451964 G2E3Q7L622 706 aa15.91■□□□□ 0.14
CSNK1E-211ENST00000451964 MYD88Q99836 296 aa15.91■□□□□ 0.14
CSNK1E-211ENST00000451964 CHMP4AQ9BY43 222 aa15.91■□□□□ 0.14
CSNK1E-211ENST00000451964 POTECB2RU33 542 aa15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 PPEF1O14829 653 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 VAMP4O75379 141 aa15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 TOMM70O94826 608 aa15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 EXOSC9Q06265 439 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 ABCC4O15439 1325 aa15.9■□□□□ 0.14
CSNK1E-211ENST00000451964 FER1L6Q2WGJ9 1857 aa15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 CC2D2BQ6DHV5 1058 aa15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 METTL22Q9BUU2 404 aaPredicted RBP15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 STK31Q9BXU1 1019 aa15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 ZNF521Q96K83 1311 aa15.89■□□□□ 0.13
CSNK1E-211ENST00000451964 PI4KAP2A4QPH2 592 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 PI4KAP1Q8N8J0 262 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 PSMD1Q99460 953 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 MAP3K2Q9Y2U5 619 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
CSNK1E-211ENST00000451964 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 BBOX1O75936 387 aa15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 DDNO94850 711 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 DDX58O95786 925 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 ZBTB38Q8NAP3 1195 aaPredicted RBP15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
CSNK1E-211ENST00000451964 VEGFAP15692 232 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-211ENST00000451964 GRAPQ13588 217 aa15.86■□□□□ 0.13
CSNK1E-211ENST00000451964 DDX46Q7L014 1031 aaKnown RBP15.86■□□□□ 0.13
CSNK1E-211ENST00000451964 GRAPLQ8TC17 118 aaPredicted RBP15.86■□□□□ 0.13
CSNK1E-211ENST00000451964 ANKRD36CQ5JPF3 1778 aa15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 CEP350Q5VT06 3117 aa15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 PCCAP05165 728 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 HSPA6P17066 643 aa15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
CSNK1E-211ENST00000451964 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 FZD9O00144 591 aa15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 FLIIQ13045 1269 aa15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 GRIPAP1Q4V328 841 aa15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 C16orf71Q8IYS4 520 aaPredicted RBP15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 ZNF541Q9H0D2 1346 aa15.84■□□□□ 0.13
CSNK1E-211ENST00000451964 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
CSNK1E-211ENST00000451964 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms