RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SRGNP10124 158 aa15.39■□□□□ 0.05
SMPD4-212ENST00000451542 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMPD4-212ENST00000451542 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
SMPD4-212ENST00000451542 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
SMPD4-212ENST00000451542 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
SMPD4-212ENST00000451542 NUTM1Q86Y26 1132 aa15.39■□□□□ 0.05
SMPD4-212ENST00000451542 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
SMPD4-212ENST00000451542 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
SMPD4-212ENST00000451542 ANKRD31Q8N7Z5 1873 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 NTSR2O95665 410 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 FLIIQ13045 1269 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-212ENST00000451542 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
SMPD4-212ENST00000451542 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 METTL22Q9BUU2 404 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-212ENST00000451542 DLEC1Q9Y238 1755 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
SMPD4-212ENST00000451542 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 KLRG2A4D1S0 409 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-212ENST00000451542 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-212ENST00000451542 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 MYD88Q99836 296 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-212ENST00000451542 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
SMPD4-212ENST00000451542 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
SMPD4-212ENST00000451542 CWC25Q9NXE8 425 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-212ENST00000451542 ARFGEF2Q9Y6D5 1785 aa15.36■□□□□ 0.05
SMPD4-212ENST00000451542 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
SMPD4-212ENST00000451542 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
SMPD4-212ENST00000451542 ZBTB38Q8NAP3 1195 aaPredicted RBP15.34■□□□□ 0.05
SMPD4-212ENST00000451542 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
SMPD4-212ENST00000451542 CDCA7LQ96GN5 454 aa15.34■□□□□ 0.05
SMPD4-212ENST00000451542 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
SMPD4-212ENST00000451542 G2E3Q7L622 706 aa15.33■□□□□ 0.04
SMPD4-212ENST00000451542 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
SMPD4-212ENST00000451542 C21orf2O43822 256 aa15.32■□□□□ 0.04
SMPD4-212ENST00000451542 PCCAP05165 728 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-212ENST00000451542 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-212ENST00000451542 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
SMPD4-212ENST00000451542 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
SMPD4-212ENST00000451542 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
SMPD4-212ENST00000451542 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
SMPD4-212ENST00000451542 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
SMPD4-212ENST00000451542 FAM89AQ96GI7 184 aa15.32■□□□□ 0.04
SMPD4-212ENST00000451542 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-212ENST00000451542 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-212ENST00000451542 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-212ENST00000451542 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
SMPD4-212ENST00000451542 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
SMPD4-212ENST00000451542 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-212ENST00000451542 ADCY9O60503 1353 aa15.31■□□□□ 0.04
SMPD4-212ENST00000451542 PTPRCP08575 1304 aa15.3■□□□□ 0.04
SMPD4-212ENST00000451542 RTKN2Q8IZC4 609 aa15.3■□□□□ 0.04
SMPD4-212ENST00000451542 CACNA1SQ13698 1873 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 BBOX1O75936 387 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 LMNB1P20700 586 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 RTL5Q5HYW3 569 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-212ENST00000451542 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
SMPD4-212ENST00000451542 CDHR2Q9BYE9 1310 aa15.28■□□□□ 0.04
SMPD4-212ENST00000451542 PDE8AO60658 829 aa15.28■□□□□ 0.04
SMPD4-212ENST00000451542 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
SMPD4-212ENST00000451542 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
SMPD4-212ENST00000451542 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
SMPD4-212ENST00000451542 RNF181Q9P0P0 153 aa15.28■□□□□ 0.04
SMPD4-212ENST00000451542 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
SMPD4-212ENST00000451542 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-212ENST00000451542 IGKV5-2P06315 115 aa15.27■□□□□ 0.04
SMPD4-212ENST00000451542 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.04
SMPD4-212ENST00000451542 CCDC152Q4G0S7 254 aa15.27■□□□□ 0.04
SMPD4-212ENST00000451542 C9orf131Q5VYM1 1079 aa15.27■□□□□ 0.04
SMPD4-212ENST00000451542 SYNE4Q8N205 404 aa15.27■□□□□ 0.04
SMPD4-212ENST00000451542 LTBP3Q9NS15 1303 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
SMPD4-212ENST00000451542 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 GRAPQ13588 217 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 GCKRQ14397 625 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 GRAPLQ8TC17 118 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-212ENST00000451542 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
SMPD4-212ENST00000451542 F6X3S4 739 aa15.25■□□□□ 0.03
SMPD4-212ENST00000451542 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
SMPD4-212ENST00000451542 UBE3BQ7Z3V4 1068 aa15.25■□□□□ 0.03
SMPD4-212ENST00000451542 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
SMPD4-212ENST00000451542 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-212ENST00000451542 ABCC4O15439 1325 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 H7C1W4 665 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 NFKBIEO00221 500 aa15.24■□□□□ 0.03
SMPD4-212ENST00000451542 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMPD4-212ENST00000451542 RASSF7Q02833 373 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms