RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 MYO19Q96H55 970 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 KCNH4Q9UQ05 1017 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 UNC13AQ9UPW8 1703 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 NACADO15069 1562 aa8.52□□□□□ -1.04
GTF3C3-207ENST00000451088 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 AMPD1P23109 780 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 DGKGP49619 791 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 OCLNQ16625 522 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 CHSY3Q70JA7 882 aa8.52□□□□□ -1.05
GTF3C3-207ENST00000451088 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
GTF3C3-207ENST00000451088 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
GTF3C3-207ENST00000451088 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
GTF3C3-207ENST00000451088 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
GTF3C3-207ENST00000451088 ELOA3CA0A087WX78 387 aaPredicted RBP8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 ELOA3DA6NLF2 546 aaPredicted RBP8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 ELOA3BQ3SY89 546 aa8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 TMEM164Q5U3C3 297 aa8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 ELOA3Q8NG57 546 aa8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 VTI1AQ96AJ9 217 aa8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 KLK14Q9P0G3 267 aa8.5□□□□□ -1.05
GTF3C3-207ENST00000451088 PRMT3O60678 531 aa8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 DGKZQ13574 1117 aa8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 LRFN2Q9ULH4 789 aa8.49□□□□□ -1.05
GTF3C3-207ENST00000451088 BICRAQ9NZM4 1560 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 GRNP28799 593 aaKnown RBP8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 INPP5BP32019 993 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 COL26A1Q96A83 441 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
GTF3C3-207ENST00000451088 GNB5O14775 395 aa8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 ALAS2P22557 587 aa8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 CLP1Q92989 425 aaKnown RBP8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 C1orf115Q9H7X2 142 aa8.47□□□□□ -1.05
GTF3C3-207ENST00000451088 PIK3R2O00459 728 aa8.46□□□□□ -1.06
GTF3C3-207ENST00000451088 COL8A1P27658 744 aa8.46□□□□□ -1.06
GTF3C3-207ENST00000451088 COX20Q5RI15 118 aa8.46□□□□□ -1.06
GTF3C3-207ENST00000451088 CXXC1Q9P0U4 656 aaPredicted RBP8.46□□□□□ -1.06
GTF3C3-207ENST00000451088 CC2D2AQ9P2K1 1620 aa8.46□□□□□ -1.06
GTF3C3-207ENST00000451088 MICAL2O94851 1124 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 EPB42P16452 691 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 IDH3AP50213 366 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 SUV39H2Q9H5I1 410 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 C11orf16Q9NQ32 467 aa8.45□□□□□ -1.06
GTF3C3-207ENST00000451088 ITGB2P05107 769 aa8.44□□□□□ -1.06
GTF3C3-207ENST00000451088 ARSDP51689 593 aa8.44□□□□□ -1.06
GTF3C3-207ENST00000451088 BHMTQ93088 406 aa8.44□□□□□ -1.06
GTF3C3-207ENST00000451088 SLAIN2Q9P270 581 aa8.44□□□□□ -1.06
GTF3C3-207ENST00000451088 STARD13Q9Y3M8 1113 aa8.44□□□□□ -1.06
GTF3C3-207ENST00000451088 IGHA1P01876 353 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 ADH7P40394 386 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 CCINQ13939 588 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 PLA2G4EQ3MJ16 856 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 IFT43Q96FT9 208 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 PRDM6Q9NQX0 595 aa8.43□□□□□ -1.06
GTF3C3-207ENST00000451088 KRBA1A5PL33 1030 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 OPLAHO14841 1288 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 CAPN12Q6ZSI9 719 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 TRIM11Q96F44 468 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 SAP130Q9H0E3 1048 aa8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
GTF3C3-207ENST00000451088 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-207ENST00000451088 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
GTF3C3-207ENST00000451088 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
GTF3C3-207ENST00000451088 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
GTF3C3-207ENST00000451088 NOP53Q9NZM5 478 aaKnown RBP8.41□□□□□ -1.06
GTF3C3-207ENST00000451088 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
GTF3C3-207ENST00000451088 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.06
GTF3C3-207ENST00000451088 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
GTF3C3-207ENST00000451088 M0R082 166 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 TNFRSF10BO14763 440 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 EGFRP00533 1210 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ALBP02768 609 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 NFKB1P19838 968 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ETFBKMTQ8IXQ9 262 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 MKNK1Q9BUB5 465 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 UBE2OQ9C0C9 1292 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
GTF3C3-207ENST00000451088 ATP2B4P23634 1241 aa8.38□□□□□ -1.07
GTF3C3-207ENST00000451088 BRD2P25440 801 aaKnown RBP8.38□□□□□ -1.07
GTF3C3-207ENST00000451088 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
GTF3C3-207ENST00000451088 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
GTF3C3-207ENST00000451088 TMEM88BA6NKF7 163 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms