RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PPP1R42Q7Z4L9 355 aa16.53■□□□□ 0.24
VPS33A-202ENST00000451053 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
VPS33A-202ENST00000451053 CCDC191Q8NCU4 936 aa16.53■□□□□ 0.24
VPS33A-202ENST00000451053 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
VPS33A-202ENST00000451053 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
VPS33A-202ENST00000451053 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 ABCC4O15439 1325 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 NPHP1O15259 732 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 PLIN1O60240 522 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 ERFEQ4G0M1 354 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 SRCIN1Q9C0H9 1055 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
VPS33A-202ENST00000451053 PPP1R1BQ9UD71 204 aaPredicted RBP16.52■□□□□ 0.24
VPS33A-202ENST00000451053 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
VPS33A-202ENST00000451053 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-202ENST00000451053 GCKRQ14397 625 aa16.51■□□□□ 0.23
VPS33A-202ENST00000451053 RTL5Q5HYW3 569 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-202ENST00000451053 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
VPS33A-202ENST00000451053 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
VPS33A-202ENST00000451053 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
VPS33A-202ENST00000451053 KIF13BQ9NQT8 1826 aa16.5■□□□□ 0.23
VPS33A-202ENST00000451053 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
VPS33A-202ENST00000451053 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
VPS33A-202ENST00000451053 ST5P78524 1137 aa16.5■□□□□ 0.23
VPS33A-202ENST00000451053 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
VPS33A-202ENST00000451053 FAM89AQ96GI7 184 aa16.5■□□□□ 0.23
VPS33A-202ENST00000451053 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
VPS33A-202ENST00000451053 RNF123Q5XPI4 1314 aa16.49■□□□□ 0.23
VPS33A-202ENST00000451053 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
VPS33A-202ENST00000451053 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
VPS33A-202ENST00000451053 NEFLP07196 543 aa16.49■□□□□ 0.23
VPS33A-202ENST00000451053 RLBP1P12271 317 aa16.49■□□□□ 0.23
VPS33A-202ENST00000451053 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
VPS33A-202ENST00000451053 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
VPS33A-202ENST00000451053 SUPT16HQ9Y5B9 1047 aaKnown RBP16.49■□□□□ 0.23
VPS33A-202ENST00000451053 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
VPS33A-202ENST00000451053 UBE3BQ7Z3V4 1068 aa16.48■□□□□ 0.23
VPS33A-202ENST00000451053 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
VPS33A-202ENST00000451053 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
VPS33A-202ENST00000451053 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
VPS33A-202ENST00000451053 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 H7C1W4 665 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
VPS33A-202ENST00000451053 INTS3Q68E01 1043 aaKnown RBP16.47■□□□□ 0.23
VPS33A-202ENST00000451053 C3orf67Q6ZVT6 689 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
VPS33A-202ENST00000451053 GRM8O00222 908 aa16.46■□□□□ 0.23
VPS33A-202ENST00000451053 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
VPS33A-202ENST00000451053 CASP7P55210 303 aa16.46■□□□□ 0.23
VPS33A-202ENST00000451053 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
VPS33A-202ENST00000451053 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
VPS33A-202ENST00000451053 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
VPS33A-202ENST00000451053 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
VPS33A-202ENST00000451053 LAMB2P55268 1798 aa16.46■□□□□ 0.22
VPS33A-202ENST00000451053 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
VPS33A-202ENST00000451053 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
VPS33A-202ENST00000451053 C20orf194Q5TEA3 1177 aa16.45■□□□□ 0.22
VPS33A-202ENST00000451053 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
VPS33A-202ENST00000451053 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
VPS33A-202ENST00000451053 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
VPS33A-202ENST00000451053 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
VPS33A-202ENST00000451053 CHRNA5P30532 468 aa16.44■□□□□ 0.22
VPS33A-202ENST00000451053 PDE6BP35913 854 aa16.44■□□□□ 0.22
VPS33A-202ENST00000451053 UTYO14607 1347 aa16.44■□□□□ 0.22
VPS33A-202ENST00000451053 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
VPS33A-202ENST00000451053 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
VPS33A-202ENST00000451053 DPEP1P16444 411 aa16.43■□□□□ 0.22
VPS33A-202ENST00000451053 TGFB2P61812 414 aa16.43■□□□□ 0.22
VPS33A-202ENST00000451053 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
VPS33A-202ENST00000451053 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
VPS33A-202ENST00000451053 MS4A1P11836 297 aa16.42■□□□□ 0.22
VPS33A-202ENST00000451053 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
VPS33A-202ENST00000451053 MEIS3Q99687 375 aa16.42■□□□□ 0.22
VPS33A-202ENST00000451053 DLEC1Q9Y238 1755 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 PDE8AO60658 829 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 SRGNP10124 158 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 KCNA3P22001 575 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 PDE3AQ14432 1141 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 CRY2Q49AN0 593 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
VPS33A-202ENST00000451053 H0YIN7 160 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 CTSWP56202 376 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 EPHA10Q5JZY3 1008 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
VPS33A-202ENST00000451053 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
VPS33A-202ENST00000451053 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
VPS33A-202ENST00000451053 FOXO4P98177 505 aa16.39■□□□□ 0.21
VPS33A-202ENST00000451053 MVPQ14764 893 aaKnown RBP16.39■□□□□ 0.21
VPS33A-202ENST00000451053 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
VPS33A-202ENST00000451053 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
VPS33A-202ENST00000451053 PDZRN3Q9UPQ7 1066 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms