RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
RFTN1-206ENST00000451036 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
RFTN1-206ENST00000451036 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
RFTN1-206ENST00000451036 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
RFTN1-206ENST00000451036 UTP14AQ9BVJ6 771 aaKnown RBP20.75■□□□□ 0.91
RFTN1-206ENST00000451036 ANKRD36CQ5JPF3 1778 aa20.74■□□□□ 0.91
RFTN1-206ENST00000451036 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
RFTN1-206ENST00000451036 GNAI1P63096 354 aa20.74■□□□□ 0.91
RFTN1-206ENST00000451036 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
RFTN1-206ENST00000451036 NLRP10Q86W26 655 aa20.74■□□□□ 0.91
RFTN1-206ENST00000451036 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
RFTN1-206ENST00000451036 RBM46Q8TBY0 533 aaKnown RBP20.74■□□□□ 0.91
RFTN1-206ENST00000451036 RPGRQ92834 1020 aaKnown RBP20.74■□□□□ 0.91
RFTN1-206ENST00000451036 DBF4Q9UBU7 674 aaPredicted RBP20.74■□□□□ 0.91
RFTN1-206ENST00000451036 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-206ENST00000451036 FKBP4Q02790 459 aaKnown RBP eCLIP20.73■□□□□ 0.91
RFTN1-206ENST00000451036 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
RFTN1-206ENST00000451036 SYNE4Q8N205 404 aa20.73■□□□□ 0.91
RFTN1-206ENST00000451036 MRS2Q9HD23 443 aa20.73■□□□□ 0.91
RFTN1-206ENST00000451036 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-206ENST00000451036 SNED1Q8TER0 1413 aa20.72■□□□□ 0.91
RFTN1-206ENST00000451036 POTECB2RU33 542 aa20.72■□□□□ 0.91
RFTN1-206ENST00000451036 ANP32CO43423 234 aa20.72■□□□□ 0.91
RFTN1-206ENST00000451036 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
RFTN1-206ENST00000451036 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
RFTN1-206ENST00000451036 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
RFTN1-206ENST00000451036 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
RFTN1-206ENST00000451036 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
RFTN1-206ENST00000451036 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.9
RFTN1-206ENST00000451036 DPY19L2Q6NUT2 758 aa20.7■□□□□ 0.9
RFTN1-206ENST00000451036 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
RFTN1-206ENST00000451036 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
RFTN1-206ENST00000451036 NLRP3Q96P20 1036 aa20.7■□□□□ 0.9
RFTN1-206ENST00000451036 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
RFTN1-206ENST00000451036 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
RFTN1-206ENST00000451036 DDNO94850 711 aaPredicted RBP20.69■□□□□ 0.9
RFTN1-206ENST00000451036 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
RFTN1-206ENST00000451036 CRAMP1Q96RY5 1269 aa20.69■□□□□ 0.9
RFTN1-206ENST00000451036 HYPKQ9NX55 129 aa20.69■□□□□ 0.9
RFTN1-206ENST00000451036 TRMT112Q9UI30 125 aaKnown RBP20.69■□□□□ 0.9
RFTN1-206ENST00000451036 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
RFTN1-206ENST00000451036 TSPYL6Q8N831 410 aa20.68■□□□□ 0.9
RFTN1-206ENST00000451036 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
RFTN1-206ENST00000451036 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
RFTN1-206ENST00000451036 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
RFTN1-206ENST00000451036 LAMB2P55268 1798 aa20.67■□□□□ 0.9
RFTN1-206ENST00000451036 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
RFTN1-206ENST00000451036 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
RFTN1-206ENST00000451036 ISCA1Q9BUE6 129 aa20.67■□□□□ 0.9
RFTN1-206ENST00000451036 SH3TC1Q8TE82 1336 aa20.67■□□□□ 0.9
RFTN1-206ENST00000451036 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
RFTN1-206ENST00000451036 APLP1P51693 650 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 FSTL1Q12841 308 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 CCDC27Q2M243 656 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 PSMD1Q99460 953 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 ABCC4O15439 1325 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 ZNF541Q9H0D2 1346 aa20.66■□□□□ 0.9
RFTN1-206ENST00000451036 CC2D2BQ6DHV5 1058 aa20.65■□□□□ 0.9
RFTN1-206ENST00000451036 SMC1BQ8NDV3 1235 aa20.65■□□□□ 0.9
RFTN1-206ENST00000451036 COL4A5P29400 1685 aa20.64■□□□□ 0.9
RFTN1-206ENST00000451036 HTRA3P83110 453 aa20.64■□□□□ 0.89
RFTN1-206ENST00000451036 FAM89AQ96GI7 184 aa20.63■□□□□ 0.89
RFTN1-206ENST00000451036 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-206ENST00000451036 DDX60Q8IY21 1712 aaKnown RBP20.62■□□□□ 0.89
RFTN1-206ENST00000451036 GOLGA2Q08379 1002 aa20.62■□□□□ 0.89
RFTN1-206ENST00000451036 RTL5Q5HYW3 569 aaPredicted RBP20.62■□□□□ 0.89
RFTN1-206ENST00000451036 RIC3Q7Z5B4 369 aa20.62■□□□□ 0.89
RFTN1-206ENST00000451036 ATP6V0A2Q9Y487 856 aa20.62■□□□□ 0.89
RFTN1-206ENST00000451036 TAF1P21675 1872 aa20.61■□□□□ 0.89
RFTN1-206ENST00000451036 FZD9O00144 591 aa20.61■□□□□ 0.89
RFTN1-206ENST00000451036 POTEIP0CG38 1075 aa20.61■□□□□ 0.89
RFTN1-206ENST00000451036 POTEJP0CG39 1038 aa20.61■□□□□ 0.89
RFTN1-206ENST00000451036 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
RFTN1-206ENST00000451036 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
RFTN1-206ENST00000451036 L3MBTL3Q96JM7 780 aaPredicted RBP20.6■□□□□ 0.89
RFTN1-206ENST00000451036 MYD88Q99836 296 aa20.6■□□□□ 0.89
RFTN1-206ENST00000451036 GRAPQ13588 217 aa20.59■□□□□ 0.89
RFTN1-206ENST00000451036 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
RFTN1-206ENST00000451036 DNAJC5GQ8N7S2 189 aa20.59■□□□□ 0.89
RFTN1-206ENST00000451036 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
RFTN1-206ENST00000451036 IL16Q14005 1332 aa20.58■□□□□ 0.89
RFTN1-206ENST00000451036 BBOX1O75936 387 aa20.58■□□□□ 0.89
RFTN1-206ENST00000451036 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
RFTN1-206ENST00000451036 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
RFTN1-206ENST00000451036 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.89
RFTN1-206ENST00000451036 JDP2Q8WYK2 163 aa20.58■□□□□ 0.89
RFTN1-206ENST00000451036 COL4A1P02462 1669 aa20.58■□□□□ 0.88
RFTN1-206ENST00000451036 IRS4O14654 1257 aaPredicted RBP20.57■□□□□ 0.88
RFTN1-206ENST00000451036 TWISTNBQ3B726 338 aaPredicted RBP20.57■□□□□ 0.88
RFTN1-206ENST00000451036 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
RFTN1-206ENST00000451036 FANCIQ9NVI1 1328 aa20.56■□□□□ 0.88
RFTN1-206ENST00000451036 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
RFTN1-206ENST00000451036 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
RFTN1-206ENST00000451036 AOC3Q16853 763 aa20.56■□□□□ 0.88
RFTN1-206ENST00000451036 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
RFTN1-206ENST00000451036 JARID2Q92833 1246 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-206ENST00000451036 TAF1DQ9H5J8 278 aaPredicted RBP20.56■□□□□ 0.88
RFTN1-206ENST00000451036 SCN4AP35499 1836 aa20.55■□□□□ 0.88
RFTN1-206ENST00000451036 PPIP5K2O43314 1243 aa20.55■□□□□ 0.88
RFTN1-206ENST00000451036 IFFO2Q5TF58 517 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms