RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 IL6STP40189 918 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-202ENST00000450991 OTUD7AQ8TE49 926 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-202ENST00000450991 MAP3K15Q6ZN16 1313 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 SALL3Q9BXA9 1300 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 LY75O60449 1722 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 EPHA10Q5JZY3 1008 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 FAM196AQ6ZSG2 479 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 BCL11BQ9C0K0 894 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-202ENST00000450991 BICC1Q9H694 974 aaKnown RBP10.22□□□□□ -0.77
NECAP1-202ENST00000450991 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-202ENST00000450991 BRWD3Q6RI45 1802 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 EIF5P55010 431 aaKnown RBP10.22□□□□□ -0.77
NECAP1-202ENST00000450991 LRRCC1Q9C099 1032 aa10.22□□□□□ -0.77
NECAP1-202ENST00000450991 CWC25Q9NXE8 425 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-202ENST00000450991 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.77
NECAP1-202ENST00000450991 CASP7P55210 303 aa10.21□□□□□ -0.77
NECAP1-202ENST00000450991 TCIRG1Q13488 830 aa10.21□□□□□ -0.77
NECAP1-202ENST00000450991 TTC22Q5TAA0 569 aa10.21□□□□□ -0.77
NECAP1-202ENST00000450991 NOP58Q9Y2X3 529 aaKnown RBP10.21□□□□□ -0.77
NECAP1-202ENST00000450991 CASZ1Q86V15 1759 aa10.21□□□□□ -0.78
NECAP1-202ENST00000450991 MSH5O43196 834 aa10.21□□□□□ -0.78
NECAP1-202ENST00000450991 RAB11FIP3O75154 756 aa10.21□□□□□ -0.78
NECAP1-202ENST00000450991 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.78
NECAP1-202ENST00000450991 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
NECAP1-202ENST00000450991 IPO9Q96P70 1041 aaKnown RBP10.2□□□□□ -0.78
NECAP1-202ENST00000450991 ISCA1Q9BUE6 129 aa10.2□□□□□ -0.78
NECAP1-202ENST00000450991 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
NECAP1-202ENST00000450991 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
NECAP1-202ENST00000450991 GNPATO15228 680 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 SURF6O75683 361 aaKnown RBP10.19□□□□□ -0.78
NECAP1-202ENST00000450991 AMIGO3Q86WK7 504 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 SYNE4Q8N205 404 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 CCDC191Q8NCU4 936 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 FAM177BA6PVY3 158 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 CAMTA2O94983 1202 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 PDE1AP54750 535 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 LAMB2P55268 1798 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 KLHDC4Q8TBB5 520 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 FAM89AQ96GI7 184 aa10.19□□□□□ -0.78
NECAP1-202ENST00000450991 H7C1W4 665 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 PHF14O94880 888 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 RABL6Q3YEC7 729 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-202ENST00000450991 NLRP10Q86W26 655 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 KIF1BPQ96EK5 621 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 STAP2Q9UGK3 403 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
NECAP1-202ENST00000450991 UBN2Q6ZU65 1347 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 ERVV-1B6SEH8 477 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-202ENST00000450991 SIL1Q9H173 461 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 DDX60Q8IY21 1712 aaKnown RBP10.17□□□□□ -0.78
NECAP1-202ENST00000450991 SCN7AQ01118 1682 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 AOX1Q06278 1338 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 MX1P20591 662 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
NECAP1-202ENST00000450991 OS9Q13438 667 aaPredicted RBP10.17□□□□□ -0.78
NECAP1-202ENST00000450991 LMBR1LQ6UX01 489 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 TBC1D9Q6ZT07 1266 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 TBC1D32Q96NH3 1257 aa10.17□□□□□ -0.78
NECAP1-202ENST00000450991 SRP68Q9UHB9 627 aaKnown RBP10.17□□□□□ -0.78
NECAP1-202ENST00000450991 PDE4CQ08493 712 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 CDC45O75419 566 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 SDSP20132 328 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-202ENST00000450991 FOXO4P98177 505 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 PKNOX2Q96KN3 472 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 AK7Q96M32 723 aa10.16□□□□□ -0.78
NECAP1-202ENST00000450991 TRMT112Q9UI30 125 aaKnown RBP10.16□□□□□ -0.78
NECAP1-202ENST00000450991 RPS6KA4O75676 772 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 APBA3O96018 575 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 RC3H1Q5TC82 1133 aaKnown RBP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 ERC1Q8IUD2 1116 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 ZNF34Q8IZ26 560 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 PROM2Q8N271 834 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 ZBTB38Q8NAP3 1195 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
NECAP1-202ENST00000450991 UPF2Q9HAU5 1272 aaKnown RBP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 NIP7Q9Y221 180 aaKnown RBP eCLIP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 RTCBQ9Y3I0 505 aaKnown RBP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 USP42Q9H9J4 1324 aaKnown RBP10.15□□□□□ -0.78
NECAP1-202ENST00000450991 PCCAP05165 728 aaPredicted RBP10.15□□□□□ -0.79
NECAP1-202ENST00000450991 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.79
NECAP1-202ENST00000450991 SUSD4Q5VX71 490 aa10.15□□□□□ -0.79
NECAP1-202ENST00000450991 USPL1Q5W0Q7 1092 aa10.15□□□□□ -0.79
NECAP1-202ENST00000450991 COPRSQ9NQ92 184 aa10.15□□□□□ -0.79
NECAP1-202ENST00000450991 C4AP0C0L4 1744 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 C4BP0C0L5 1744 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 SASH1O94885 1247 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
NECAP1-202ENST00000450991 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms