RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
CAPN13-202ENST00000450650 EP400NLQ6ZTU2 488 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 ZBTB9Q96C00 473 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
CAPN13-202ENST00000450650 KCNJ4P48050 445 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 TEFQ10587 303 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
CAPN13-202ENST00000450650 NLRP2Q9NX02 1062 aa11.32□□□□□ -0.6
CAPN13-202ENST00000450650 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
CAPN13-202ENST00000450650 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
CAPN13-202ENST00000450650 GORABQ5T7V8 394 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
CAPN13-202ENST00000450650 RAPGEF4Q8WZA2 1011 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 MAFGO15525 162 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 CSB-PGBD3P0DP91 1061 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
CAPN13-202ENST00000450650 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
CAPN13-202ENST00000450650 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 TSR1Q2NL82 804 aaKnown RBP11.3□□□□□ -0.6
CAPN13-202ENST00000450650 G2E3Q7L622 706 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 UBXN4Q92575 508 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.3□□□□□ -0.6
CAPN13-202ENST00000450650 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 PLEKHG2Q9H7P9 1386 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 TATP17735 454 aaPredicted RBP11.3□□□□□ -0.6
CAPN13-202ENST00000450650 MPNDQ8N594 471 aa11.3□□□□□ -0.6
CAPN13-202ENST00000450650 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
CAPN13-202ENST00000450650 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 HOXB7P09629 217 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 MRE11P49959 708 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 EIF4A1P60842 406 aaKnown RBP11.29□□□□□ -0.6
CAPN13-202ENST00000450650 AMHR2Q16671 573 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
CAPN13-202ENST00000450650 HDGFL1Q5TGJ6 251 aa11.29□□□□□ -0.6
CAPN13-202ENST00000450650 ADAMTS7Q9UKP4 1686 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 NHSL1Q5SYE7 1610 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 UQCRHLA0A096LP55 91 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 TBC1D12O60347 775 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 UQCRHP07919 91 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 NUCB1Q02818 461 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 DPH6Q7L8W6 267 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
CAPN13-202ENST00000450650 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 MEGF6O75095 1541 aa11.28□□□□□ -0.6
CAPN13-202ENST00000450650 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 F6X3S4 739 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 SATB1Q01826 763 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.6
CAPN13-202ENST00000450650 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 GIPC2Q8TF65 315 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 USTQ9Y2C2 406 aa11.27□□□□□ -0.6
CAPN13-202ENST00000450650 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.61
CAPN13-202ENST00000450650 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CAPN13-202ENST00000450650 MFRPQ9BY79 579 aa11.27□□□□□ -0.61
CAPN13-202ENST00000450650 TSPYL1Q9H0U9 437 aa11.27□□□□□ -0.61
CAPN13-202ENST00000450650 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.61
CAPN13-202ENST00000450650 TULP2O00295 520 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 KCNQ3O43525 872 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 ZNF500O60304 480 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-202ENST00000450650 TOM1O60784 492 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 BECN1Q14457 450 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 DNAJC14Q6Y2X3 702 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-202ENST00000450650 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-202ENST00000450650 PHKG2P15735 406 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 MAP2K1Q02750 393 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-202ENST00000450650 SPTY2D1Q68D10 685 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-202ENST00000450650 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 MEIS3Q99687 375 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
CAPN13-202ENST00000450650 EIF2S2P20042 333 aaKnown RBP11.25□□□□□ -0.61
CAPN13-202ENST00000450650 RPAP2Q8IXW5 612 aaPredicted RBP11.25□□□□□ -0.61
CAPN13-202ENST00000450650 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 WDR17Q8IZU2 1322 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 FECHP22830 423 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 CBX1P83916 185 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 R3HCC1Q9Y3T6 440 aaKnown RBP11.25□□□□□ -0.61
CAPN13-202ENST00000450650 CEP83Q9Y592 693 aa11.25□□□□□ -0.61
CAPN13-202ENST00000450650 KDM6AO15550 1401 aaPredicted RBP11.25□□□□□ -0.61
CAPN13-202ENST00000450650 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
CAPN13-202ENST00000450650 SCN11AQ9UI33 1791 aa11.24□□□□□ -0.61
CAPN13-202ENST00000450650 GOLIM4O00461 696 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms